RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 PLP2Q04941 152 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 TWIST1Q15672 202 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 LINC00173Q6ZV60 143 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 SH2D6Q7Z4S9 175 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 PDPNQ86YL7 162 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 TUSC5Q8IXB3 177 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 OSR1Q8TAX0 266 aaPredicted RBP4.03□□□□□ -1.76
SSX9-202ENST00000608568 ZNF488Q96MN9 340 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 RTL8AQ9BWD3 113 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 IMUPQ9GZP8 106 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 ENY2Q9NPA8 101 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 NHP2Q9NX24 153 aaKnown RBP4.03□□□□□ -1.76
SSX9-202ENST00000608568 TCF19Q9Y242 345 aa4.03□□□□□ -1.76
SSX9-202ENST00000608568 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 TRBV25-1A0A075B6N4 114 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 TMEM30CPA0ZSE6 113 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 A8MWV9 139 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 INS-IGF2F8WCM5 200 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 J3QT63 122 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 HOXA3O43365 443 aaPredicted RBP4.02□□□□□ -1.77
SSX9-202ENST00000608568 LTAP01374 205 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 IGHV3-9P01782 118 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FAM106CPP0CH98 169 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 IGHV1-2P23083 117 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 GATA3P23771 443 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 MYCNOSP40205 109 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 NMUP48645 174 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 BSPH1Q075Z2 132 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FAM106AQ4KMX7 169 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 MIR17HGQ75NE6 70 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 ZNF329Q86UD4 541 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 ABHD12Q8N2K0 398 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 MRAPQ8TCY5 172 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 MYOZ3Q8TDC0 251 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 DDB2Q92466 427 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FAM168AQ92567 244 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 GPHA2Q96T91 129 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 OR2H1Q9GZK4 316 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FBXL15Q9H469 300 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FAM30AQ9NZY2 134 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 TP73-AS1Q9UF72 201 aa4.02□□□□□ -1.77
SSX9-202ENST00000608568 FOXA2Q9Y261 457 aaPredicted RBP4.02□□□□□ -1.77
SSX9-202ENST00000608568 CSDC2Q9Y534 153 aaKnown RBP4.02□□□□□ -1.77
SSX9-202ENST00000608568 IGHV4-30-2A0A087WSY4 118 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 FAM240AA0A1B0GVK7 77 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 C5orf49A4QMS7 147 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 SH2D7A6NKC9 451 aaPredicted RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 C15orf61A6NNL5 157 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 J3KT08 172 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 OVOL3O00110 214 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 LY6HO94772 140 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 DPM2O94777 84 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 IGKCP01834 107 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 SCGB1C2P0DMR2 95 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 DEFA4P12838 97 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
SSX9-202ENST00000608568 ATP5J2P56134 94 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 UBE2D3P61077 147 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 HSPE1P61604 102 aaKnown RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 UBE2D2P62837 147 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 CACNG7P62955 275 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 UBE2L3P68036 154 aaKnown RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 ZNF816Q0VGE8 651 aaPredicted RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 ZNF672Q499Z4 452 aaPredicted RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 C2orf83Q53S99 150 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 C11orf71Q6IPW1 123 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 ORMDL3Q8N138 153 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 OR11H6Q8NGC7 330 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 OR4C13Q8NGP0 309 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 OR1L8Q8NGR8 309 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 ZNF503Q96F45 646 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 ZC2HC1AQ96GY0 325 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 NAA38Q9BRA0 125 aaKnown RBP4.01□□□□□ -1.77
SSX9-202ENST00000608568 PRRG4Q9BZD6 226 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 C19orf73Q9NVV2 129 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 ONECUT1Q9UBC0 465 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 PRNDQ9UKY0 176 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 EPDR1Q9UM22 224 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 DSCAML1Q8TD84 2053 aa4.01□□□□□ -1.77
SSX9-202ENST00000608568 TRBV7-3A0A075B6L6 115 aa4□□□□□ -1.77
SSX9-202ENST00000608568 SMIM9A6NGZ8 99 aa4□□□□□ -1.77
SSX9-202ENST00000608568 NCBP2LA6PVI3 153 aaKnown RBP4□□□□□ -1.77
SSX9-202ENST00000608568 C17orf98A8MV24 154 aa4□□□□□ -1.77
SSX9-202ENST00000608568 SNAI2O43623 268 aa4□□□□□ -1.77
SSX9-202ENST00000608568 NPYP01303 97 aa4□□□□□ -1.77
SSX9-202ENST00000608568 ZNF32P17041 273 aa4□□□□□ -1.77
SSX9-202ENST00000608568 PLNP26678 52 aa4□□□□□ -1.77
SSX9-202ENST00000608568 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
SSX9-202ENST00000608568 PAX8Q06710 450 aa4□□□□□ -1.77
SSX9-202ENST00000608568 MSMPQ1L6U9 139 aa4□□□□□ -1.77
SSX9-202ENST00000608568 TMEM30BQ3MIR4 351 aa4□□□□□ -1.77
SSX9-202ENST00000608568 SPRNQ5BIV9 151 aa4□□□□□ -1.77
SSX9-202ENST00000608568 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
SSX9-202ENST00000608568 UTF1Q5T230 341 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 389.5 ms