RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SDF2L1Q9HCN8 221 aa16.76■□□□□ 0.27
IRF3-227ENST00000600911 XCL2Q9UBD3 114 aa16.76■□□□□ 0.27
IRF3-227ENST00000600911 FBLL1A6NHQ2 334 aaKnown RBP16.75■□□□□ 0.27
IRF3-227ENST00000600911 CDKN1BP46527 198 aa16.75■□□□□ 0.27
IRF3-227ENST00000600911 COX8CQ7Z4L0 72 aa16.75■□□□□ 0.27
IRF3-227ENST00000600911 TUBA4BQ9H853 241 aa16.75■□□□□ 0.27
IRF3-227ENST00000600911 LENEPQ9Y5L5 61 aa16.75■□□□□ 0.27
IRF3-227ENST00000600911 GCGP01275 180 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 MGST1P10620 155 aaKnown RBP16.74■□□□□ 0.27
IRF3-227ENST00000600911 RNASE4P34096 147 aaKnown RBP16.74■□□□□ 0.27
IRF3-227ENST00000600911 SEC11CQ9BY50 192 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 C11orf21Q9P2W6 132 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 LOC102724200A0A096LPH7 203 aaPredicted RBP16.74■□□□□ 0.27
IRF3-227ENST00000600911 LEPP41159 167 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 TMEM241Q24JQ0 296 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 FAM74A3Q4VXF1 159 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 SAPCD1Q5SSQ6 148 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 PRR27Q6MZM9 219 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 NAT8Q9UHE5 227 aa16.74■□□□□ 0.27
IRF3-227ENST00000600911 TRAV12-3A0A0B4J271 114 aa16.73■□□□□ 0.27
IRF3-227ENST00000600911 TRBV7-9A0A0J9YWB2 115 aa16.73■□□□□ 0.27
IRF3-227ENST00000600911 GPX1P07203 203 aa16.73■□□□□ 0.27
IRF3-227ENST00000600911 NDFIP1Q9BT67 221 aa16.73■□□□□ 0.27
IRF3-227ENST00000600911 A8MZ25 164 aa16.72■□□□□ 0.27
IRF3-227ENST00000600911 CA1P00915 261 aaPredicted RBP16.72■□□□□ 0.27
IRF3-227ENST00000600911 PRM2P04554 102 aa16.72■□□□□ 0.27
IRF3-227ENST00000600911 FRMD6-AS1P0C7T7 363 aa16.72■□□□□ 0.27
IRF3-227ENST00000600911 SMUG1Q53HV7 270 aa16.72■□□□□ 0.27
IRF3-227ENST00000600911 CARHSP1Q9Y2V2 147 aaKnown RBP16.72■□□□□ 0.27
IRF3-227ENST00000600911 ZNF324O75467 553 aaPredicted RBP16.71■□□□□ 0.27
IRF3-227ENST00000600911 ADIRFQ15847 76 aa16.71■□□□□ 0.27
IRF3-227ENST00000600911 CSNK1G2-AS1Q8NCQ2 148 aa16.71■□□□□ 0.27
IRF3-227ENST00000600911 CSTL1Q9H114 145 aa16.71■□□□□ 0.27
IRF3-227ENST00000600911 C7orf71A4D174 169 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 SH2D1AO60880 128 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 C1orf158Q8N1D5 194 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 NIPSNAP3BQ9BS92 247 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 RNASE7Q9H1E1 156 aaKnown RBP16.7■□□□□ 0.26
IRF3-227ENST00000600911 LY96Q9Y6Y9 160 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 Q6AWC8 147 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 ZNF575Q86XF7 245 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 ISOC2Q96AB3 205 aa16.7■□□□□ 0.26
IRF3-227ENST00000600911 C19orf71A6NCJ1 209 aa16.69■□□□□ 0.26
IRF3-227ENST00000600911 MORN3Q6PF18 240 aaPredicted RBP16.69■□□□□ 0.26
IRF3-227ENST00000600911 SMIM12Q96EX1 92 aa16.69■□□□□ 0.26
IRF3-227ENST00000600911 TSPOP30536 169 aa16.68■□□□□ 0.26
IRF3-227ENST00000600911 DNAH9Q9NYC9 4486 aa16.67■□□□□ 0.26
IRF3-227ENST00000600911 ATP6V1G1O75348 118 aa16.67■□□□□ 0.26
IRF3-227ENST00000600911 RPL19P84098 196 aaKnown RBP16.67■□□□□ 0.26
IRF3-227ENST00000600911 APOC3P02656 99 aa16.67■□□□□ 0.26
IRF3-227ENST00000600911 PFN1P07737 140 aaKnown RBP16.67■□□□□ 0.26
IRF3-227ENST00000600911 NUTF2P61970 127 aaKnown RBP16.67■□□□□ 0.26
IRF3-227ENST00000600911 MUC21Q5SSG8 566 aa16.67■□□□□ 0.26
IRF3-227ENST00000600911 HUWE1Q7Z6Z7 4374 aaKnown RBP16.66■□□□□ 0.26
IRF3-227ENST00000600911 PRKDCP78527 4128 aaKnown RBP16.66■□□□□ 0.26
IRF3-227ENST00000600911 KRBOX1C9JBD0 128 aa16.66■□□□□ 0.26
IRF3-227ENST00000600911 FAM162BQ5T6X4 162 aa16.66■□□□□ 0.26
IRF3-227ENST00000600911 NUDT10Q8NFP7 164 aa16.66■□□□□ 0.26
IRF3-227ENST00000600911 NUDT11Q96G61 164 aa16.66■□□□□ 0.26
IRF3-227ENST00000600911 NBEAL2Q6ZNJ1 2754 aa16.66■□□□□ 0.26
IRF3-227ENST00000600911 IGKV3D-20A0A0C4DH25 116 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 KIR2DL5BA0A0G2JN68 375 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 KIR2DL5BA0A0G2JPC4 375 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 M0R036 132 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 DEFB135Q30KP9 77 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 DEFB121Q5J5C9 76 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 KIR2DL5AQ8N109 375 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 KIR2DL5BQ8NHK3 375 aa16.65■□□□□ 0.26
IRF3-227ENST00000600911 INSP01308 110 aa16.64■□□□□ 0.25
IRF3-227ENST00000600911 RETNQ9HD89 108 aa16.64■□□□□ 0.25
IRF3-227ENST00000600911 TP53TG3Q9ULZ0 132 aa16.64■□□□□ 0.25
IRF3-227ENST00000600911 IGHV3OR16-12A0A075B7B8 117 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 TRAV21A0A0B4J279 112 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 FABP5P3A8MUU1 101 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 ANXA2RQ3ZCQ2 193 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 NAGKQ9UJ70 344 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 MEGF8Q7Z7M0 2845 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 TMSB15BA0A087X1C1 80 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 AMBPP02760 352 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 APOC4P55056 127 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 ATRAIDQ6UW56 229 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 SBSPONQ8IVN8 264 aa16.63■□□□□ 0.25
IRF3-227ENST00000600911 DEFA6Q01524 100 aa16.62■□□□□ 0.25
IRF3-227ENST00000600911 IBA57Q5T440 356 aaKnown RBP16.62■□□□□ 0.25
IRF3-227ENST00000600911 SFRP2Q96HF1 295 aa16.62■□□□□ 0.25
IRF3-227ENST00000600911 ERVFC1-1P60608 527 aa16.61■□□□□ 0.25
IRF3-227ENST00000600911 MRAPQ8TCY5 172 aa16.61■□□□□ 0.25
IRF3-227ENST00000600911 GNRH2O43555 120 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 GZMBP10144 247 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 AZU1P20160 251 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 PNRC1Q12796 327 aaPredicted RBP16.6■□□□□ 0.25
IRF3-227ENST00000600911 RNF212Q495C1 297 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 ZNF705AQ6ZN79 300 aaPredicted RBP16.6■□□□□ 0.25
IRF3-227ENST00000600911 FAM231DQ6ZW35 169 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 CLRN3Q8NCR9 226 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 C1QTNF4Q9BXJ3 329 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 V9GYV3 84 aa16.6■□□□□ 0.25
IRF3-227ENST00000600911 ZNF705GA8MUZ8 300 aaPredicted RBP16.59■□□□□ 0.25
IRF3-227ENST00000600911 ORM1P02763 201 aa16.59■□□□□ 0.25
IRF3-227ENST00000600911 HTN1P15515 57 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms