RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZNF705DP0CH99 300 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF705BP0CI00 300 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 RBMY1A1P0DJD3 496 aaKnown RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 RBMY1CP0DJD4 496 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 GALR1P47211 349 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 POLR2GP62487 172 aaKnown RBP eCLIP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 IL15RAQ13261 267 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 RBMY1FQ15415 496 aaKnown RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 IAH1Q2TAA2 248 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 KRTAP13-3Q3SY46 172 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 PSMG4Q5JS54 123 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ACTL10Q5JWF8 245 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 SPANXN5Q5MJ07 72 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 LGALS9CQ6DKI2 356 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF705AQ6ZN79 300 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 FOXI2Q6ZQN5 318 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ACOT7LQ6ZUV0 252 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 S100A7AQ86SG5 101 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR8I2Q8N0Y5 310 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR10P1Q8NGE3 313 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF431Q8TF32 576 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 S100ZQ8WXG8 99 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 PBDC1Q9BVG4 233 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 MAGT1Q9H0U3 335 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 C20orf85Q9H1P6 137 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 SAV1Q9H4B6 383 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 C11orf1Q9H5F2 150 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 PSENENQ9NZ42 101 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 FLVCR2Q9UPI3 526 aa2.39□□□□□ -2.03
CKS1BP3-201ENST00000600888 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 TRAV10A0A0B4J240 114 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 A0A0J9YX75 114 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 C7orf66A4D0T2 115 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM189A5PLL7 270 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 H3BP45 60 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 H3BRN7 92 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 MRPS12O15235 138 aaKnown RBP2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 IL5P05113 134 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPL7P18124 248 aaKnown RBP2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 CXCL2P19875 107 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 B2MP61769 119 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 PSG9Q00887 426 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 AKR1C1Q04828 323 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 OR2F1Q13607 317 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 OXA1LQ15070 435 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 GDF5OSQ5U4N7 250 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 AMTNQ6UX39 209 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 CYP2G1PQ6ZSU1 146 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 SHANK2-AS3Q9BTD1 123 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 TMEM147Q9BVK8 224 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC25A39Q9BZJ4 359 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPRMQ9NS64 109 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 PRO0461Q9UI25 63 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 TBC1D24Q9ULP9 559 aa2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 RCL1Q9Y2P8 373 aaKnown RBP2.38□□□□□ -2.03
CKS1BP3-201ENST00000600888 TRAV6A0A075B6T7 132 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 TRAV8-2A0A0B4J237 113 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 LINC00854A0A1B0GVQ3 168 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM240BA0A1B0GVZ2 78 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 AGPAT2O15120 278 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 SSSCA1O60232 199 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 MPDU1O75352 247 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 HYPMO75409 117 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 UPK1BO75841 260 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 CCNKO75909 580 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 LY6G6CO95867 125 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 METTL15P1P0C7V9 234 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 LINC00869P0C866 280 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 ORM2P19652 201 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 HLA-DMBP28068 263 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 TSPOP30536 169 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 S100A11P31949 105 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 RPL29P47914 159 aaKnown RBP2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF846Q147U1 533 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 ATP6V1FQ16864 119 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 C12orf74Q32Q52 190 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM78BQ5VT40 261 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 EBLN2Q6P2I7 272 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 PATE2Q6UY27 113 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 ZNF546Q86UE3 836 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 C1orf158Q8N1D5 194 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 C12orf45Q8N5I9 185 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 PPP1R14BQ96C90 147 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 FAM210BQ96KR6 192 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 LINC00052Q96N35 136 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 RSG1Q9BU20 258 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 RNF126Q9BV68 326 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 SCRT1Q9BWW7 348 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 ARV1Q9H2C2 271 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 SLC25A22Q9H936 323 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 LYRM2Q9NU23 88 aaPredicted RBP2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 NUDT15Q9NV35 164 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 GSKIPQ9P0R6 139 aa2.37□□□□□ -2.03
CKS1BP3-201ENST00000600888 DOK5Q9P104 306 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms