RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 ZNF680Q8NEM1 530 aa9.36□□□□□ -0.91
SRRM1-223ENST00000600523 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
SRRM1-223ENST00000600523 CBY3A6NI87 242 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 PEX7O00628 323 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 DAD1P61803 113 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-223ENST00000600523 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 FAM222AQ5U5X8 452 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-223ENST00000600523 EIF4E3Q8N5X7 224 aaKnown RBP9.35□□□□□ -0.91
SRRM1-223ENST00000600523 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 MANBALQ9NQG1 85 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
SRRM1-223ENST00000600523 TIMM8BQ9Y5J9 83 aaPredicted RBP9.35□□□□□ -0.91
SRRM1-223ENST00000600523 TRAV8-1A0A0A6YYK1 113 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 TRAV1-1A0A0B4J248 108 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 PAGE4O60829 102 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 UBE2G1P62253 170 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 PRNTQ86SH4 94 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 LINC00467Q9BRT7 94 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
SRRM1-223ENST00000600523 IGHV1OR15-1A0A075B7D0 117 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 ZNF324O75467 553 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-223ENST00000600523 S100A9P06702 114 aaKnown RBP9.33□□□□□ -0.92
SRRM1-223ENST00000600523 NKX2-5P52952 324 aaPredicted RBP9.33□□□□□ -0.92
SRRM1-223ENST00000600523 BLOC1S1P78537 153 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 FMC1Q96HJ9 113 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
SRRM1-223ENST00000600523 AZU1P20160 251 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 TAGLN2P37802 199 aaKnown RBP9.32□□□□□ -0.92
SRRM1-223ENST00000600523 AKR1C3P42330 323 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 ANXA2RQ3ZCQ2 193 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 Q6AWC8 147 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 Q6ZTC4 211 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 RNASE8Q8TDE3 154 aaKnown RBP9.32□□□□□ -0.92
SRRM1-223ENST00000600523 KCNS1Q96KK3 526 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 SGK494Q96LW2 274 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 NAGKQ9UJ70 344 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 CELA1Q9UNI1 258 aa9.32□□□□□ -0.92
SRRM1-223ENST00000600523 TRGV11A0A075B6L2 103 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 DEFB131BA0A096LNP1 70 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 PRM2P04554 102 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 DEFB130BP0DP73 79 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 DEFB130AP0DP74 79 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 TCTAP57738 103 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 ZNF415Q09FC8 603 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 ALKAL2Q6UX46 152 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
SRRM1-223ENST00000600523 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
SRRM1-223ENST00000600523 GCGP01275 180 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 HTN3P15516 51 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 ATP5G3P48201 142 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 IBA57Q5T440 356 aaKnown RBP9.3□□□□□ -0.92
SRRM1-223ENST00000600523 PRR9Q5T870 116 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 ZNF767PQ75MW2 155 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 SDF2L1Q9HCN8 221 aa9.3□□□□□ -0.92
SRRM1-223ENST00000600523 TRAV34A0A0B4J273 112 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 IGLL5B9A064 214 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 IGLV2-11P01706 119 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
SRRM1-223ENST00000600523 Q86TA4 180 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 GSN-AS1Q9NRJ2 163 aa9.29□□□□□ -0.92
SRRM1-223ENST00000600523 PDE6DO43924 150 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 ATP5G1P05496 136 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 PFN1P07737 140 aaKnown RBP9.28□□□□□ -0.92
SRRM1-223ENST00000600523 TMEM183BQ1AE95 376 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 FAM210BQ96KR6 192 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 KLF12Q9Y4X4 402 aa9.28□□□□□ -0.92
SRRM1-223ENST00000600523 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 TRBV6-1A0A0K0K1D8 114 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 PLAC8L1A1L4L8 177 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 FABP5P3A8MUU1 101 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 TCL1AP56279 114 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 CCL20P78556 96 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
SRRM1-223ENST00000600523 TDRG1Q3Y452 100 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 SPXQ9BT56 116 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 VAX2Q9UIW0 290 aa9.27□□□□□ -0.93
SRRM1-223ENST00000600523 TRGV1A0A0A0MS02 117 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 SCO2A0A1W2PP80 73 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 GAGE7O76087 117 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
SRRM1-223ENST00000600523 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms