RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 C2CD4CQ8TF44 421 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 VAX2Q9UIW0 290 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 PSG8Q9UQ74 426 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 KLF12Q9Y4X4 402 aa13.66□□□□□ -0.22
CCDC9-205ENST00000600117 FBLL1A6NHQ2 334 aaKnown RBP13.65□□□□□ -0.22
CCDC9-205ENST00000600117 TAGLN2P37802 199 aaKnown RBP13.65□□□□□ -0.22
CCDC9-205ENST00000600117 MEF2BQ02080 365 aaPredicted RBP13.65□□□□□ -0.22
CCDC9-205ENST00000600117 ZNF767PQ75MW2 155 aa13.65□□□□□ -0.22
CCDC9-205ENST00000600117 C11orf52Q96A22 123 aa13.65□□□□□ -0.22
CCDC9-205ENST00000600117 J3KRW8 73 aa13.64□□□□□ -0.23
CCDC9-205ENST00000600117 RARRES2Q99969 163 aa13.64□□□□□ -0.23
CCDC9-205ENST00000600117 EDA2RQ9HAV5 297 aa13.64□□□□□ -0.23
CCDC9-205ENST00000600117 X6R8D5 127 aa13.64□□□□□ -0.23
CCDC9-205ENST00000600117 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 RBFOX3A6NFN3 312 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 AKR1C3P42330 323 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 BTN1A1Q13410 526 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 ZNF506Q5JVG8 444 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 PRNTQ86SH4 94 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 Q86TA4 180 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 FAM210AQ96ND0 272 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 GOLT1BQ9Y3E0 138 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 RYR1P21817 5038 aa13.63□□□□□ -0.23
CCDC9-205ENST00000600117 PCLOQ9Y6V0 5065 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 C7orf71A4D174 169 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 TMEM183BQ1AE95 376 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 FMC1Q96HJ9 113 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 C20orf144Q9BQM9 153 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
CCDC9-205ENST00000600117 PDE6DO43924 150 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 GPX1P07203 203 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
CCDC9-205ENST00000600117 TOR2AQ5JU69 321 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 C8orf49Q96NF6 230 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 NEU1Q99519 415 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 NDFIP1Q9BT67 221 aa13.61□□□□□ -0.23
CCDC9-205ENST00000600117 IGHV3OR16-12A0A075B7B8 117 aa13.6□□□□□ -0.23
CCDC9-205ENST00000600117 TRAV12-3A0A0B4J271 114 aa13.6□□□□□ -0.23
CCDC9-205ENST00000600117 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
CCDC9-205ENST00000600117 UBE2G1P62253 170 aa13.6□□□□□ -0.23
CCDC9-205ENST00000600117 Q6ZQT7 251 aa13.6□□□□□ -0.23
CCDC9-205ENST00000600117 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
CCDC9-205ENST00000600117 CLLU1Q5K131 121 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 SAPCD1Q5SSQ6 148 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 Q6AWC8 147 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 TMEM256Q8N2U0 113 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 Q8NAQ8 132 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 DERL1Q9BUN8 251 aa13.59□□□□□ -0.23
CCDC9-205ENST00000600117 LTAP01374 205 aa13.58□□□□□ -0.24
CCDC9-205ENST00000600117 RAB14P61106 215 aa13.58□□□□□ -0.24
CCDC9-205ENST00000600117 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
CCDC9-205ENST00000600117 TMEM208Q9BTX3 173 aa13.58□□□□□ -0.24
CCDC9-205ENST00000600117 ZFP30Q9Y2G7 519 aa13.58□□□□□ -0.24
CCDC9-205ENST00000600117 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 H7BYZ3 331 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 NDUFS6O75380 124 aaKnown RBP13.57□□□□□ -0.24
CCDC9-205ENST00000600117 PRM2P04554 102 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 MIFP14174 115 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 RPL35P42766 123 aaKnown RBP13.57□□□□□ -0.24
CCDC9-205ENST00000600117 ZNF80P51504 273 aaPredicted RBP13.57□□□□□ -0.24
CCDC9-205ENST00000600117 LINC01587Q99440 93 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 NIPSNAP3BQ9BS92 247 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
CCDC9-205ENST00000600117 MED9Q9NWA0 146 aa13.57□□□□□ -0.24
CCDC9-205ENST00000600117 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 ZNF705GA8MUZ8 300 aaPredicted RBP13.56□□□□□ -0.24
CCDC9-205ENST00000600117 TMEM250H0YL14 139 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 RGS13O14921 159 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 TAS2R60P59551 318 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 SMUG1Q53HV7 270 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 LINC00467Q9BRT7 94 aa13.56□□□□□ -0.24
CCDC9-205ENST00000600117 GCGP01275 180 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 SRP19P09132 144 aaKnown RBP13.55□□□□□ -0.24
CCDC9-205ENST00000600117 SRSF3P84103 164 aaKnown RBP13.55□□□□□ -0.24
CCDC9-205ENST00000600117 TMEM183AQ8IXX5 376 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 ZC2HC1AQ96GY0 325 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 MLST8Q9BVC4 326 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 DNAH10Q8IVF4 4471 aa13.55□□□□□ -0.24
CCDC9-205ENST00000600117 HECTD4Q9Y4D8 3996 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 RAB19A4D1S5 217 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 AZU1P20160 251 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 RRN3P1Q2M238 152 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
CCDC9-205ENST00000600117 C11orf68Q9H3H3 251 aaKnown RBP13.54□□□□□ -0.24
CCDC9-205ENST00000600117 TRBV20OR9-2A0A075B6H5 130 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 A0A0J9YWU9 116 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 C9JQL5 133 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 DEFB4AO15263 64 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 CRIP1P50238 77 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 CENPWQ5EE01 88 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 NHLRC2Q8NBF2 726 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 PARLQ9H300 379 aa13.53□□□□□ -0.24
CCDC9-205ENST00000600117 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.25
CCDC9-205ENST00000600117 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
CCDC9-205ENST00000600117 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.25
CCDC9-205ENST00000600117 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.25
CCDC9-205ENST00000600117 KMT2AQ03164 3969 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms