RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 Q9H8V8 135 aa15.99■□□□□ 0.15
SSBP4-205ENST00000598159 OTORQ9NRC9 128 aa15.99■□□□□ 0.15
SSBP4-205ENST00000598159 PGPA6NDG6 321 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 Q6ZQT7 251 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 ARL6IP6Q8N6S5 226 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 CMTM2Q8TAZ6 248 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 TMED6Q8WW62 240 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 MED28Q9H204 178 aa15.98■□□□□ 0.15
SSBP4-205ENST00000598159 ESRGQ1W209 222 aa15.97■□□□□ 0.15
SSBP4-205ENST00000598159 OR10G4Q8NGN3 311 aa15.97■□□□□ 0.15
SSBP4-205ENST00000598159 OR10G9Q8NGN4 311 aa15.97■□□□□ 0.15
SSBP4-205ENST00000598159 OR10G7Q8NGN6 311 aa15.97■□□□□ 0.15
SSBP4-205ENST00000598159 HYLS1Q96M11 299 aa15.97■□□□□ 0.15
SSBP4-205ENST00000598159 C6orf223Q8N319 242 aa15.96■□□□□ 0.15
SSBP4-205ENST00000598159 VSIG2Q96IQ7 327 aa15.96■□□□□ 0.15
SSBP4-205ENST00000598159 MUC4Q99102 2169 aa15.96■□□□□ 0.14
SSBP4-205ENST00000598159 RAB2AP61019 212 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 ZNF415Q09FC8 603 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 Q6AWC8 147 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 ST6GAL2Q96JF0 529 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 UPK3BQ9BT76 320 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 HERC2O95714 4834 aa15.95■□□□□ 0.14
SSBP4-205ENST00000598159 EIF3GO75821 320 aaKnown RBP eCLIP15.94■□□□□ 0.14
SSBP4-205ENST00000598159 AQP10Q96PS8 301 aa15.94■□□□□ 0.14
SSBP4-205ENST00000598159 A0A096LPF7 62 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 MED14OSP0DP75 135 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 SLAQ13239 276 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 MUC21Q5SSG8 566 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 FAM159AQ6UWV7 190 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 OR2G3Q8NGZ4 309 aa15.93■□□□□ 0.14
SSBP4-205ENST00000598159 MRPS16Q9Y3D3 137 aaKnown RBP15.93■□□□□ 0.14
SSBP4-205ENST00000598159 TTC32Q5I0X7 151 aa15.92■□□□□ 0.14
SSBP4-205ENST00000598159 ASB13Q8WXK3 278 aa15.92■□□□□ 0.14
SSBP4-205ENST00000598159 PSMG3Q9BT73 122 aaPredicted RBP15.92■□□□□ 0.14
SSBP4-205ENST00000598159 MRPL16Q9NX20 251 aaKnown RBP15.92■□□□□ 0.14
SSBP4-205ENST00000598159 PAX4O43316 350 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 CDC34P49427 236 aaPredicted RBP15.91■□□□□ 0.14
SSBP4-205ENST00000598159 SERF2P84101 59 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 HSD17B11Q8NBQ5 300 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 SPXQ9BT56 116 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 PRO0255Q9UI72 69 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 RPH3ALQ9UNE2 315 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 PKHD1P08F94 4074 aa15.91■□□□□ 0.14
SSBP4-205ENST00000598159 TRGV11A0A075B6L2 103 aa15.9■□□□□ 0.14
SSBP4-205ENST00000598159 HMGB3O15347 200 aaKnown RBP15.9■□□□□ 0.14
SSBP4-205ENST00000598159 MBP02144 154 aa15.9■□□□□ 0.14
SSBP4-205ENST00000598159 GOLT1AQ6ZVE7 132 aa15.9■□□□□ 0.14
SSBP4-205ENST00000598159 MDFICQ9P1T7 246 aa15.9■□□□□ 0.14
SSBP4-205ENST00000598159 A0A1W2PPQ1 181 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 IGHV3-53P01767 116 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 GIPP09681 153 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-205ENST00000598159 STAG3L2P0CL84 134 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 STAG3L3P0CL85 134 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 ATP6V0CP27449 155 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 TNP2Q05952 138 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 TDRG1Q3Y452 100 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 HHLA3Q9XRX5 114 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 ICOSQ9Y6W8 199 aa15.89■□□□□ 0.13
SSBP4-205ENST00000598159 ARL14EPLP0DKL9 152 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 TMEM183BQ1AE95 376 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 Q5BKY6 102 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 TMEM183AQ8IXX5 376 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 INO80EQ8NBZ0 244 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-205ENST00000598159 RASL10AQ92737 203 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 RAB24Q969Q5 203 aa15.88■□□□□ 0.13
SSBP4-205ENST00000598159 KIAA1109Q2LD37 5005 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 TRAV21A0A0B4J279 112 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 SERTM2A0A1B0GWG4 89 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 BTF3P20290 206 aaKnown RBP15.87■□□□□ 0.13
SSBP4-205ENST00000598159 CRYBA4P53673 196 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 FHL2Q14192 279 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 IQCF2Q8IXL9 164 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 SUN5Q8TC36 379 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 TREM1Q9NP99 234 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 TNFSF18Q9UNG2 199 aa15.87■□□□□ 0.13
SSBP4-205ENST00000598159 PKD1P98161 4303 aa15.86■□□□□ 0.13
SSBP4-205ENST00000598159 TRGV4A0A0C4DH28 118 aa15.85■□□□□ 0.13
SSBP4-205ENST00000598159 GCHFRP30047 84 aa15.85■□□□□ 0.13
SSBP4-205ENST00000598159 MRPL23Q16540 153 aaKnown RBP15.85■□□□□ 0.13
SSBP4-205ENST00000598159 TVP23CQ96ET8 276 aa15.85■□□□□ 0.13
SSBP4-205ENST00000598159 ACTR3CQ9C0K3 210 aaPredicted RBP15.85■□□□□ 0.13
SSBP4-205ENST00000598159 NAGKQ9UJ70 344 aa15.85■□□□□ 0.13
SSBP4-205ENST00000598159 TRAV8-1A0A0A6YYK1 113 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 GNRH2O43555 120 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 CXorf1O96002 111 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 GNG5P63218 68 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 C5orf17Q8NAS9 161 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 KCNS1Q96KK3 526 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 C8orf49Q96NF6 230 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 NDFIP1Q9BT67 221 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 TMEM167BQ9NRX6 74 aa15.84■□□□□ 0.13
SSBP4-205ENST00000598159 K7EQM0 130 aa15.83■□□□□ 0.12
SSBP4-205ENST00000598159 KRTAP1-5Q9BYS1 174 aa15.83■□□□□ 0.12
SSBP4-205ENST00000598159 BORCS7-ASMTA0A0B4J1R7 106 aa15.82■□□□□ 0.12
SSBP4-205ENST00000598159 M0R2P5 195 aa15.82■□□□□ 0.12
SSBP4-205ENST00000598159 TCRAP04437 139 aa15.82■□□□□ 0.12
SSBP4-205ENST00000598159 SUMO1P63165 101 aaKnown RBP15.82■□□□□ 0.12
SSBP4-205ENST00000598159 ZNF479Q96JC4 524 aa15.82■□□□□ 0.12
SSBP4-205ENST00000598159 SH3BGRL3Q9H299 93 aa15.82■□□□□ 0.12
SSBP4-205ENST00000598159 IGHV3-16A0A0C4DH30 117 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms