RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TSPOP30536 169 aa17.33■□□□□ 0.37
SRRM1-222ENST00000596378 SRSF2Q01130 221 aaKnown RBP17.33■□□□□ 0.37
SRRM1-222ENST00000596378 ZANQ9Y493 2812 aa17.33■□□□□ 0.36
SRRM1-222ENST00000596378 POLQO75417 2590 aa17.33■□□□□ 0.36
SRRM1-222ENST00000596378 GAS8-AS1O95177 125 aa17.33■□□□□ 0.36
SRRM1-222ENST00000596378 CKS2P33552 79 aa17.33■□□□□ 0.36
SRRM1-222ENST00000596378 TFPI2P48307 235 aa17.33■□□□□ 0.36
SRRM1-222ENST00000596378 FOXE3Q13461 319 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 C20orf202A1L168 122 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 DEFB1P60022 68 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 DMRTA1Q5VZB9 504 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 GPHB5Q86YW7 130 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 OR10AG1Q8NH19 301 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 ATP6V0BQ99437 205 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 ZNF747Q9BV97 191 aa17.32■□□□□ 0.36
SRRM1-222ENST00000596378 TMEM95Q3KNT9 176 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 LAMTOR2Q9Y2Q5 125 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 B4DSR2 109 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 PET117Q6UWS5 81 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 PRSS57Q6UWY2 283 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 MRPL53Q96EL3 112 aaKnown RBP17.31■□□□□ 0.36
SRRM1-222ENST00000596378 RNF185Q96GF1 192 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 TMEM191AQ9H0A3 160 aa17.31■□□□□ 0.36
SRRM1-222ENST00000596378 C9orf47Q6ZRZ4 202 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 OR4X2Q8NGF9 303 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 CNFNQ9BYD5 112 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 ANKRD17O75179 2603 aaKnown RBP17.3■□□□□ 0.36
SRRM1-222ENST00000596378 J3KRW8 73 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 NDUFA4O00483 81 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 PRR9Q5T870 116 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 MAPK1IP1LQ8NDC0 245 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 ZNF738Q8NE65 137 aa17.3■□□□□ 0.36
SRRM1-222ENST00000596378 FAM208BQ5VWN6 2430 aa17.29■□□□□ 0.36
SRRM1-222ENST00000596378 STPG4Q8N801 248 aa17.29■□□□□ 0.36
SRRM1-222ENST00000596378 SPOCK3Q9BQ16 436 aa17.29■□□□□ 0.36
SRRM1-222ENST00000596378 USP9YO00507 2555 aaPredicted RBP17.29■□□□□ 0.36
SRRM1-222ENST00000596378 IGKV3-7A0A075B6H7 116 aa17.29■□□□□ 0.36
SRRM1-222ENST00000596378 ZNF25P17030 456 aaPredicted RBP17.28■□□□□ 0.36
SRRM1-222ENST00000596378 HIST1H1AQ02539 215 aaPredicted RBP17.28■□□□□ 0.36
SRRM1-222ENST00000596378 OR8A1Q8NGG7 326 aa17.28■□□□□ 0.36
SRRM1-222ENST00000596378 USMG5Q96IX5 58 aa17.28■□□□□ 0.36
SRRM1-222ENST00000596378 C9orf139Q6ZV77 190 aa17.27■□□□□ 0.36
SRRM1-222ENST00000596378 HINT1P49773 126 aaPredicted RBP17.27■□□□□ 0.35
SRRM1-222ENST00000596378 RPL11P62913 178 aaKnown RBP17.27■□□□□ 0.35
SRRM1-222ENST00000596378 LINC01545Q5VT33 79 aa17.27■□□□□ 0.35
SRRM1-222ENST00000596378 CYB5R2Q6BCY4 276 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 LRRK2Q5S007 2527 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 H3BUA1 57 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
SRRM1-222ENST00000596378 EDN2P20800 178 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 TM4SF20Q53R12 229 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 NPFFR1Q9GZQ6 430 aa17.26■□□□□ 0.35
SRRM1-222ENST00000596378 IGLV1-40P01703 118 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 IGHV4-59P01825 116 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 EVI2AP22794 236 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 COL5A1-AS1Q5SY13 56 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 ST20Q9HBF5 79 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 IGHV7-4-1A0A0J9YVY3 117 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 SOCS3O14543 225 aa17.25■□□□□ 0.35
SRRM1-222ENST00000596378 MRPS16Q9Y3D3 137 aaKnown RBP17.25■□□□□ 0.35
SRRM1-222ENST00000596378 DEFB112Q30KQ8 113 aa17.24■□□□□ 0.35
SRRM1-222ENST00000596378 BBC3Q96PG8 261 aaPredicted RBP17.24■□□□□ 0.35
SRRM1-222ENST00000596378 A1L4Q6 167 aa17.23■□□□□ 0.35
SRRM1-222ENST00000596378 F6UB75 175 aa17.23■□□□□ 0.35
SRRM1-222ENST00000596378 BRI3O95415 125 aa17.23■□□□□ 0.35
SRRM1-222ENST00000596378 CFHR3Q02985 330 aa17.23■□□□□ 0.35
SRRM1-222ENST00000596378 HSBP1L1C9JCN9 74 aa17.22■□□□□ 0.35
SRRM1-222ENST00000596378 TCF21O43680 179 aa17.22■□□□□ 0.35
SRRM1-222ENST00000596378 C10orf99Q6UWK7 81 aa17.22■□□□□ 0.35
SRRM1-222ENST00000596378 SRD5A1P18405 259 aa17.22■□□□□ 0.35
SRRM1-222ENST00000596378 WFDC3Q8IUB2 231 aa17.22■□□□□ 0.35
SRRM1-222ENST00000596378 HBDP02042 147 aa17.21■□□□□ 0.35
SRRM1-222ENST00000596378 TMEM208Q9BTX3 173 aa17.21■□□□□ 0.35
SRRM1-222ENST00000596378 RHPN1-AS1Q9BWJ2 59 aa17.21■□□□□ 0.35
SRRM1-222ENST00000596378 SPRY2O43597 315 aa17.21■□□□□ 0.35
SRRM1-222ENST00000596378 TNFRSF6BO95407 300 aa17.21■□□□□ 0.35
SRRM1-222ENST00000596378 H3BVH4 76 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 DSCR9P59020 149 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 MAP1LC3AQ9H492 121 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 SCRT2Q9NQ03 307 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 PPP1R14DQ9NXH3 145 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 A0A0G2JLM5 398 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 LINC01356Q8N9X3 169 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 UFC1Q9Y3C8 167 aa17.2■□□□□ 0.34
SRRM1-222ENST00000596378 A0A096LNT2 108 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 TRAV26-2A0A0B4J265 109 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 SLC25A16P16260 332 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 KIR3DS1Q14943 382 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 ZFAND2AQ8N6M9 145 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 OR10J6PQ8NGY7 276 aa17.19■□□□□ 0.34
SRRM1-222ENST00000596378 UBR5O95071 2799 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-222ENST00000596378 TGFAP01135 160 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 PPBPP02775 128 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 GATA3P23771 443 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 CACNG7P62955 275 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 Q6ZVH6 145 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 SLC25A34Q6PIV7 304 aa17.18■□□□□ 0.34
SRRM1-222ENST00000596378 DAZ1Q9NQZ3 744 aaKnown RBP17.18■□□□□ 0.34
SRRM1-222ENST00000596378 SRSF1Q07955 248 aaKnown RBP eCLIP17.17■□□□□ 0.347e-9■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms