RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 GNPNAT1Q96EK6 184 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
SHKBP1-202ENST00000593764 IGHV1OR15-1A0A075B7D0 117 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 RGS13O14921 159 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 RNF212Q495C1 297 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 GOLT1AQ6ZVE7 132 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 ACTR3CQ9C0K3 210 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 CYTL1Q9NRR1 136 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 RPH3ALQ9UNE2 315 aa12.94□□□□□ -0.34
SHKBP1-202ENST00000593764 ARPC5O15511 151 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 HOXA5P20719 270 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 TCL1AP56279 114 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 GNG5P63218 68 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 IBA57Q5T440 356 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 Q6AWC8 147 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 TVP23CQ96ET8 276 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
SHKBP1-202ENST00000593764 FAT2Q9NYQ8 4349 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 SPINK4O60575 86 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 CXorf1O96002 111 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 UBE2DNLQ8IWF7 75 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 C18orf15Q96N68 181 aa12.92□□□□□ -0.34
SHKBP1-202ENST00000593764 TAAR5O14804 337 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 NUDT3O95989 172 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 OR5I1Q13606 314 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 TMPRSS5Q9H3S3 457 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 DNAH17Q9UFH2 4485 aa12.91□□□□□ -0.34
SHKBP1-202ENST00000593764 HECTD4Q9Y4D8 3996 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 M0R2N4 97 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 C5orf17Q8NAS9 161 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 TMEM167BQ9NRX6 74 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 MUC4Q99102 2169 aa12.9□□□□□ -0.34
SHKBP1-202ENST00000593764 TRAV26-1A0A087WT03 109 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 GGTLC3B5MD39 225 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 TCRAP04437 139 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 SUMO1P63165 101 aaKnown RBP12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 LGALS9BQ3B8N2 356 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 OR11H4Q8NGC9 324 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 MDFICQ9P1T7 246 aa12.89□□□□□ -0.35
SHKBP1-202ENST00000593764 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 Q6ZR54 194 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 ARPC5LQ9BPX5 153 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
SHKBP1-202ENST00000593764 A0A0J9YY99 117 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 IGLV2-11P01706 119 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 FAM3BP58499 235 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 TDRG1Q3Y452 100 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 MRPL16Q9NX20 251 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-202ENST00000593764 A0A1W2PRE2 83 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 F6UZH7 168 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 H3BNG1 76 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 ZNF345Q14585 488 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 FAM159AQ6UWV7 190 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 ATG101Q9BSB4 218 aa12.86□□□□□ -0.35
SHKBP1-202ENST00000593764 FGF8P55075 233 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 TMEM183AQ8IXX5 376 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 LINC00588Q9Y4M8 146 aa12.85□□□□□ -0.35
SHKBP1-202ENST00000593764 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 RTL8CO15255 209 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 GNRH2O43555 120 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 CCL18P55774 89 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 C8orf49Q96NF6 230 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 PSG8Q9UQ74 426 aa12.84□□□□□ -0.35
SHKBP1-202ENST00000593764 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
SHKBP1-202ENST00000593764 K7EQM0 130 aa12.83□□□□□ -0.36
SHKBP1-202ENST00000593764 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-202ENST00000593764 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
SHKBP1-202ENST00000593764 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
SHKBP1-202ENST00000593764 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 FAM74A7A6NL05 159 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 IGHV3-53P01767 116 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 FHITP49789 147 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 UBE2G2P60604 165 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 TMEM75Q8N9X5 138 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 RASL10AQ92737 203 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 LINC00479Q96M42 142 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 SPXQ9BT56 116 aa12.82□□□□□ -0.36
SHKBP1-202ENST00000593764 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms