RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 MRPL54Q6P161 138 aaKnown RBP7.09□□□□□ -1.27
VPS25-205ENST00000590339 RBPMS2Q6ZRY4 209 aaKnown RBP7.09□□□□□ -1.27
VPS25-205ENST00000590339 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 GATD1Q8NB37 220 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 C4orf3Q8WVX3 66 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 NDFIP1Q9BT67 221 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 OVOL1O14753 267 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 PRB2P02812 416 aaPredicted RBP7.08□□□□□ -1.28
VPS25-205ENST00000590339 S100A8P05109 93 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 ZNF80P51504 273 aaPredicted RBP7.08□□□□□ -1.28
VPS25-205ENST00000590339 ZNF138P52744 262 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
VPS25-205ENST00000590339 SMUG1Q53HV7 270 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 KHDC1LQ5JSQ8 128 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 GDF5OSQ5U4N7 250 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 Q6AWC8 147 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 DCANP1Q8TF63 244 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 AGPAT4-IT1Q9H0P7 198 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 LENEPQ9Y5L5 61 aa7.08□□□□□ -1.28
VPS25-205ENST00000590339 XKRY2A2RUG3 117 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 C2orf70A6NJV1 201 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 SPINK4O60575 86 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 HBBP68871 147 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 LINC01559Q495D7 138 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 OXLD1Q5BKU9 147 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 GFI1BQ5VTD9 330 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 ZNF738Q8NE65 137 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 FAM19A4Q96LR4 140 aa7.07□□□□□ -1.28
VPS25-205ENST00000590339 TRBV7-9A0A0J9YWB2 115 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 ADARB2-AS1A8MUL3 147 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 LINC01619G3V211 115 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 IGLC6P0CF74 106 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 GZMBP10144 247 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 CTRLP40313 264 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 AKR1D1P51857 326 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 SYNJ2BPP57105 145 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 RPS20P60866 119 aaKnown RBP7.06□□□□□ -1.28
VPS25-205ENST00000590339 HIST1H1AQ02539 215 aaPredicted RBP7.06□□□□□ -1.28
VPS25-205ENST00000590339 TMEM78Q5T7P6 136 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 ADAMTSL5Q6ZMM2 481 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 APRG1Q8IVJ8 170 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 PGLYRP4Q96LB8 373 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 TP53TG3Q9ULZ0 132 aa7.06□□□□□ -1.28
VPS25-205ENST00000590339 A0A1B0GW15 77 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 TMEM189A5PLL7 270 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 K7EQG2 157 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 ESDP10768 282 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 SLURP1P55000 103 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 LINC00310P59036 64 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 Q0VG73 95 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 SLAQ13239 276 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 FHL3Q13643 280 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 DEFB136Q30KP8 78 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 ZFAND2AQ8N6M9 145 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 OR8A1Q8NGG7 326 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 LINC00477Q96M19 166 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 TSSC4Q9Y5U2 329 aaPredicted RBP7.05□□□□□ -1.28
VPS25-205ENST00000590339 WNK1Q9H4A3 2382 aa7.05□□□□□ -1.28
VPS25-205ENST00000590339 PKD1L1Q8TDX9 2849 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 A0A1B0GUT8 65 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 FABP5P3A8MUU1 101 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 APCSP02743 223 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 AMBPP02760 352 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 PF4P02776 101 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 ARMS2P0C7Q2 107 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 IGLL1P15814 213 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 CRISP2P16562 243 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 CD33P20138 364 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 ID1P41134 155 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 BEAN1Q3B7T3 259 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 PRR9Q5T870 116 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 SAMD5Q5TGI4 173 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 KLHL30-AS1Q8NEE0 82 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 OR1N2Q8NGR9 330 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 OR10J6PQ8NGY7 276 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 CNFNQ9BYD5 112 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 MS4A6AQ9H2W1 248 aa7.04□□□□□ -1.28
VPS25-205ENST00000590339 TRAV2A0A0B4J234 112 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 GRIFINA4D1Z8 144 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 RAB4BP61018 213 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 RIGQ13278 110 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 OR10J3Q5JRS4 329 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 OR11H1Q8NG94 326 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 ODF3Q96PU9 254 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 C11orf21Q9P2W6 132 aa7.03□□□□□ -1.28
VPS25-205ENST00000590339 MEGF8Q7Z7M0 2845 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 IGKV3-7A0A075B6H7 116 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 IGKV3D-20A0A0C4DH25 116 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 F2Z2F3 143 aa7.02□□□□□ -1.29
VPS25-205ENST00000590339 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
VPS25-205ENST00000590339 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms