RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PSMB8P28062 276 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PSMB3P49720 205 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 SERF2P84101 59 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 OR2F1Q13607 317 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 HES1Q14469 280 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 EDDM3AQ14507 147 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF431Q8TF32 576 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 ARHGAP5-AS1Q96IT6 56 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 C2orf50Q96LR7 162 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PSMG3Q9BT73 122 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 SLC39A9Q9NUM3 307 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM14CQ9P0S9 112 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 DOK5Q9P104 306 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 NAGKQ9UJ70 344 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 MAP1AP78559 2803 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 RYR1P21817 5038 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A0D9SG52 128 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A1W2PPR1 153 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PGLYRP1O75594 196 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 IFNA1P01562 189 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 IFNA5P01569 189 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PPP1CCP36873 323 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 AESQ08117 197 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 FXYD3Q14802 87 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 NEDD8Q15843 81 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 RGS21Q2M5E4 152 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 LAIR2Q6ISS4 152 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 UNQ5815/PRO19632Q6UWF5 114 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 Q6ZR54 194 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TCF23Q7RTU1 214 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 COMMD7Q86VX2 200 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF709Q8N972 641 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 STOML3Q8TAV4 291 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM203Q969S6 136 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 FMC1Q96HJ9 113 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM147Q9BVK8 224 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 OR2D2Q9H210 308 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 PARP11Q9NR21 331 aa1.37□□□□□ -2.19
SMCHD1-211ENST00000584897 TGP01266 2768 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 RP1L1Q8IWN7 2480 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SPTBN1Q01082 2364 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 F5H768 121 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1D-33P01593 117 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 IGKV1-33P01594 117 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TCRBP04435 133 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC00614P0C842 121 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SAA2P0DJI9 122 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 HIST1H1EP10412 219 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 NFYBP25208 207 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 AKR1D1P51857 326 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 AKR1C2P52895 323 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 KRTAP10-5P60370 271 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SNRPD3P62318 126 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF345Q14585 488 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PYDC2Q56P42 97 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LYPD2Q6UXB3 125 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM144Q7Z5S9 345 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 CBLN2Q8IUK8 224 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC01006Q8NI28 216 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DYNLRB2Q8TF09 96 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SRSF12Q8WXF0 261 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PACRGQ96M98 296 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF2Q9BSG1 426 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 NPVFQ9HCQ7 196 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 NDUFA4L2Q9NRX3 87 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM167BQ9NRX6 74 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 YLPM1P49750 1951 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 STAB1Q9NY15 2570 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 HUWE1Q7Z6Z7 4374 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 INTS1Q8N201 2190 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PKHD1P08F94 4074 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LOC102724200A0A096LPH7 203 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 A0A0J9YXV3 536 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 PGPA6NDG6 321 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 H3BNG1 76 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 CCNKO75909 580 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DEFA4P12838 97 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ELK1P19419 428 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 G0S2P27469 103 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 POLR2IP36954 125 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LPAR6P43657 344 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 RPS20P60866 119 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 TMEM241Q24JQ0 296 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 CASC10Q5T4H9 136 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LCN15Q6UWW0 184 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 SCGB1D4Q6XE38 83 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF826PQ6ZT77 177 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 LINC01551Q86U37 167 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10P1Q8NGE3 313 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 OR1L1Q8NH94 360 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 OR10C1Q96KK4 312 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 MED28Q9H204 178 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 C11orf68Q9H3H3 251 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 MAP1LC3AQ9H492 121 aa1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 ZNF430Q9H8G1 570 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 DAZ1Q9NQZ3 744 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-211ENST00000584897 C21orf62Q9NYP8 219 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 202.2 ms