RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 SIGMAR1Q99720 223 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
RNF43-207ENST00000583753 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
RNF43-207ENST00000583753 K7EIM0 57 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 DEFB1P60022 68 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 C3orf36Q3SXR2 165 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
RNF43-207ENST00000583753 PCSK5Q92824 1860 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 B9A039 149 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 WFDC2Q14508 124 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 C2orf91Q6ZV80 131 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 PRAC2D3DTV9 90 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 G3V318 75 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 H3BRN7 92 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
RNF43-207ENST00000583753 ZNF80P51504 273 aaPredicted RBP8.31□□□□□ -1.08
RNF43-207ENST00000583753 C5orf64Q2M2E5 130 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 LGALS9BQ3B8N2 356 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 LGALS9CQ6DKI2 356 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
RNF43-207ENST00000583753 METTL26Q96S19 204 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 I3L2K1 104 aa8.31□□□□□ -1.08
RNF43-207ENST00000583753 NXT2Q9NPJ8 142 aaKnown RBP8.31□□□□□ -1.08
RNF43-207ENST00000583753 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 TEX22C9J3V5 150 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 AZU1P20160 251 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 DYNAPQ8N1N2 210 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 ATP5LO75964 103 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
RNF43-207ENST00000583753 MYCNOSP40205 109 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 SPTBN4Q9H254 2564 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 PRSS2P07478 247 aa8.3□□□□□ -1.08
RNF43-207ENST00000583753 TRBV25-1A0A075B6N4 114 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 TRGV3P03979 118 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 Q6ZS92 163 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 ZNF256Q9Y2P7 627 aaPredicted RBP8.29□□□□□ -1.08
RNF43-207ENST00000583753 NDUFS8O00217 210 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 THBDP07204 575 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 NUP37Q8NFH4 326 aa8.29□□□□□ -1.08
RNF43-207ENST00000583753 PF4V1P10720 104 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 CCDC144NLQ6NUI1 221 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 TNFRSF14Q92956 283 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 NPFFR1Q9GZQ6 430 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 LAGE3Q14657 143 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 BOD1L2Q8IYS8 172 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 CFHR4Q92496 578 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 TMEM14CQ9P0S9 112 aa8.28□□□□□ -1.08
RNF43-207ENST00000583753 CRYGCP07315 174 aa8.27□□□□□ -1.08
RNF43-207ENST00000583753 LINC00311Q8N616 119 aa8.27□□□□□ -1.08
RNF43-207ENST00000583753 A0A1B0GV72 72 aa8.27□□□□□ -1.09
RNF43-207ENST00000583753 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
RNF43-207ENST00000583753 HOXA3O43365 443 aaPredicted RBP8.27□□□□□ -1.09
RNF43-207ENST00000583753 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
RNF43-207ENST00000583753 OR10J6PQ8NGY7 276 aa8.27□□□□□ -1.09
RNF43-207ENST00000583753 USP9XQ93008 2570 aaPredicted RBP8.27□□□□□ -1.09
RNF43-207ENST00000583753 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
RNF43-207ENST00000583753 VMO1Q7Z5L0 202 aa8.27□□□□□ -1.09
RNF43-207ENST00000583753 FCN3O75636 299 aa8.26□□□□□ -1.09
RNF43-207ENST00000583753 SRSF1Q07955 248 aaKnown RBP eCLIP8.26□□□□□ -1.092e-7■■□□□ 11.6
RNF43-207ENST00000583753 LYPD1Q8N2G4 141 aa8.26□□□□□ -1.09
RNF43-207ENST00000583753 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 Q6ZQT7 251 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 CCDC168Q8NDH2 2452 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 A0A087WWL8 130 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 GAGE12HA6NDE8 117 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 F6UB75 175 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 HLA-DRB4P13762 266 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 C1orf122Q6ZSJ8 110 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 HLA-DRB4X5D2U9 266 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 SLC25A16P16260 332 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 HERVK_113P61574 105 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 NPC2P61916 151 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 KLHL30-AS1Q8NEE0 82 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 RAX2Q96IS3 184 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 SRSF8Q9BRL6 282 aaKnown RBP8.25□□□□□ -1.09
RNF43-207ENST00000583753 AGPAT4-IT1Q9H0P7 198 aa8.25□□□□□ -1.09
RNF43-207ENST00000583753 G3V4G9 280 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 FSTL3O95633 263 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 PRTN3P24158 256 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 KHDC1LQ5JSQ8 128 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 CEND1Q8N111 149 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 TNRC6BQ9UPQ9 1833 aaKnown RBP8.24□□□□□ -1.09
RNF43-207ENST00000583753 RAI1Q7Z5J4 1906 aaPredicted RBP8.24□□□□□ -1.09
RNF43-207ENST00000583753 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 CKS1BP61024 79 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 ZNF56Q15929 161 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 BRD3OSQ6XYD6 125 aa8.24□□□□□ -1.09
RNF43-207ENST00000583753 SHISA9B4DS77 424 aa8.23□□□□□ -1.09
RNF43-207ENST00000583753 FGF6P10767 208 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms