RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 ACTR3CQ9C0K3 210 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-219ENST00000580540 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
SREBF1-219ENST00000580540 TRGV2A0A075B6R0 118 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 TRGV1A0A0A0MS02 117 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 TRBV7-9A0A0J9YWB2 115 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 SMLR1H3BR10 107 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 ARPC5O15511 151 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 GCHFRP30047 84 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 GNG5P63218 68 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
SREBF1-219ENST00000580540 C11orf72Q8NBR9 251 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 GNPNAT1Q96EK6 184 aaPredicted RBP11.67□□□□□ -0.54
SREBF1-219ENST00000580540 KLF12Q9Y4X4 402 aa11.67□□□□□ -0.54
SREBF1-219ENST00000580540 A0A0J9YY99 117 aa11.66□□□□□ -0.54
SREBF1-219ENST00000580540 RNF212Q495C1 297 aa11.66□□□□□ -0.54
SREBF1-219ENST00000580540 TMPRSS5Q9H3S3 457 aa11.66□□□□□ -0.54
SREBF1-219ENST00000580540 TRAV26-1A0A087WT03 109 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 G3V3Q6 166 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 CXorf1O96002 111 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 HOXA5P20719 270 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 NAGKQ9UJ70 344 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 FRAS1Q86XX4 4008 aa11.65□□□□□ -0.54
SREBF1-219ENST00000580540 TRAV8-1A0A0A6YYK1 113 aa11.64□□□□□ -0.55
SREBF1-219ENST00000580540 TCL1AP56279 114 aa11.64□□□□□ -0.55
SREBF1-219ENST00000580540 ST6GAL2Q96JF0 529 aa11.64□□□□□ -0.55
SREBF1-219ENST00000580540 TMEM167BQ9NRX6 74 aa11.64□□□□□ -0.55
SREBF1-219ENST00000580540 MRPL16Q9NX20 251 aaKnown RBP11.64□□□□□ -0.55
SREBF1-219ENST00000580540 ZNF415Q09FC8 603 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 AKR1C8PQ5T2L2 129 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 IBA57Q5T440 356 aaKnown RBP11.63□□□□□ -0.55
SREBF1-219ENST00000580540 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 TMED6Q8WW62 240 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
SREBF1-219ENST00000580540 F6UZH7 168 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 TAAR5O14804 337 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 SPINK4O60575 86 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 IGHV3-53P01767 116 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 CCL18P55774 89 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
SREBF1-219ENST00000580540 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 Q6AWC8 147 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 ARL6IP6Q8N6S5 226 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
SREBF1-219ENST00000580540 K7EQM0 130 aa11.61□□□□□ -0.55
SREBF1-219ENST00000580540 LGALS9BQ3B8N2 356 aa11.61□□□□□ -0.55
SREBF1-219ENST00000580540 SUN5Q8TC36 379 aa11.61□□□□□ -0.55
SREBF1-219ENST00000580540 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
SREBF1-219ENST00000580540 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 TCRAP04437 139 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-219ENST00000580540 UBE2G2P60604 165 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 ZNF726P1Q15940 193 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 NDFIP1Q9BT67 221 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 CYTL1Q9NRR1 136 aa11.6□□□□□ -0.55
SREBF1-219ENST00000580540 DNAH2Q9P225 4427 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 TRGV11A0A075B6L2 103 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 SERTM2A0A1B0GWG4 89 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 GGTLC3B5MD39 225 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 FAM3BP58499 235 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-219ENST00000580540 EPDR1Q9UM22 224 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 PSG8Q9UQ74 426 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
SREBF1-219ENST00000580540 GNRH2O43555 120 aa11.58□□□□□ -0.56
SREBF1-219ENST00000580540 IFNA7P01567 189 aa11.58□□□□□ -0.56
SREBF1-219ENST00000580540 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
SREBF1-219ENST00000580540 C18orf15Q96N68 181 aa11.58□□□□□ -0.56
SREBF1-219ENST00000580540 C8orf49Q96NF6 230 aa11.58□□□□□ -0.56
SREBF1-219ENST00000580540 FLI1Q01543 452 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-219ENST00000580540 Q6ZR54 194 aa11.57□□□□□ -0.56
SREBF1-219ENST00000580540 LINC00336Q6ZUF6 198 aa11.57□□□□□ -0.56
SREBF1-219ENST00000580540 KCNRGQ8N5I3 272 aa11.57□□□□□ -0.56
SREBF1-219ENST00000580540 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
SREBF1-219ENST00000580540 DNAH17Q9UFH2 4485 aa11.57□□□□□ -0.56
SREBF1-219ENST00000580540 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 MAP1LC3B2A6NCE7 125 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 PAX4O43316 350 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 OR11H4Q8NGC9 324 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 MUC4Q99102 2169 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 SPXQ9BT56 116 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 MAP1LC3BQ9GZQ8 125 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 SDF2L1Q9HCN8 221 aa11.56□□□□□ -0.56
SREBF1-219ENST00000580540 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 PRSS29PA6NIE9 313 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 H3BNG1 76 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 RTL8CO15255 209 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 GCGP01275 180 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 ESRGQ1W209 222 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
SREBF1-219ENST00000580540 ZNF471Q9BX82 626 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms