RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TRAV6A0A075B6T7 132 aa12.18□□□□□ -0.46
MKS1-209ENST00000580127 IGKV2-40A0A087WW87 121 aaPredicted RBP12.18□□□□□ -0.46
MKS1-209ENST00000580127 FAM229AH3BQW9 127 aa12.18□□□□□ -0.46
MKS1-209ENST00000580127 IGKV2D-40P01614 121 aaPredicted RBP12.18□□□□□ -0.46
MKS1-209ENST00000580127 GCSHP23434 173 aa12.18□□□□□ -0.46
MKS1-209ENST00000580127 XGP55808 180 aa12.18□□□□□ -0.46
MKS1-209ENST00000580127 SDHCQ99643 169 aaPredicted RBP12.18□□□□□ -0.46
MKS1-209ENST00000580127 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
MKS1-209ENST00000580127 IGSF23A1L1A6 192 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 Q5VSD8 79 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 SLC25A31Q9H0C2 315 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 C11orf1Q9H5F2 150 aa12.17□□□□□ -0.46
MKS1-209ENST00000580127 RBAKDNA6NC62 111 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 C9JCJ5 164 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 K7EQD1 137 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 GYPEP15421 78 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 RAB32Q13637 225 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 RASL10AQ92737 203 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 SEC22CQ9BRL7 303 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 NUDT15Q9NV35 164 aa12.16□□□□□ -0.46
MKS1-209ENST00000580127 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 PLA2G10O15496 165 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 PSCAO43653 123 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 FUSP35637 526 aaKnown RBP eCLIP12.15□□□□□ -0.46
MKS1-209ENST00000580127 ZNF266Q14584 549 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
MKS1-209ENST00000580127 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
MKS1-209ENST00000580127 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.46
MKS1-209ENST00000580127 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 CRYGDP07320 174 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 DNAH10OSP0CZ25 163 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 GCSAMLQ5JQS6 135 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 FAM167A-AS1Q96KT0 104 aa12.14□□□□□ -0.47
MKS1-209ENST00000580127 OR7C2O60412 319 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 OR10J4P0C629 311 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
MKS1-209ENST00000580127 IL15RAQ13261 267 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 PRR9Q5T870 116 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 OR4C5Q8NGB2 326 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 OR5C1Q8NGR4 320 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 MDFICQ9P1T7 246 aa12.13□□□□□ -0.47
MKS1-209ENST00000580127 NHLH2Q02577 135 aa12.12□□□□□ -0.47
MKS1-209ENST00000580127 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
MKS1-209ENST00000580127 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
MKS1-209ENST00000580127 FXYD5Q96DB9 178 aa12.12□□□□□ -0.47
MKS1-209ENST00000580127 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 FAM240BA0A1B0GVZ2 78 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 SFTA3P0C7M3 94 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 MZT2BQ6NZ67 158 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 Q6ZQT7 251 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 Q8TAT8 98 aa12.11□□□□□ -0.47
MKS1-209ENST00000580127 NTN5Q8WTR8 489 aaPredicted RBP12.11□□□□□ -0.47
MKS1-209ENST00000580127 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 M0R2P5 195 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 TAS2R45P59539 299 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
MKS1-209ENST00000580127 Q6AWC8 147 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 ATP5SQ99766 215 aa12.1□□□□□ -0.47
MKS1-209ENST00000580127 IGHV3-38A0A0C4DH36 116 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 SMR3BP02814 79 aaPredicted RBP12.09□□□□□ -0.47
MKS1-209ENST00000580127 PFN1P07737 140 aaKnown RBP12.09□□□□□ -0.47
MKS1-209ENST00000580127 PPT1P50897 306 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 TIRAPP58753 221 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 CMTM2Q8TAZ6 248 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 TMEM70Q9BUB7 260 aa12.09□□□□□ -0.47
MKS1-209ENST00000580127 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
MKS1-209ENST00000580127 TDRG1Q3Y452 100 aa12.08□□□□□ -0.48
MKS1-209ENST00000580127 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
MKS1-209ENST00000580127 KCNS1Q96KK3 526 aa12.08□□□□□ -0.48
MKS1-209ENST00000580127 CCDC32Q9BV29 185 aa12.08□□□□□ -0.48
MKS1-209ENST00000580127 NAGKQ9UJ70 344 aa12.08□□□□□ -0.48
MKS1-209ENST00000580127 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 CIDEAO60543 219 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 Q6ZSN1 163 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 NMES1Q9C002 83 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
MKS1-209ENST00000580127 SH3BGRL3Q9H299 93 aa12.07□□□□□ -0.48
MKS1-209ENST00000580127 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
MKS1-209ENST00000580127 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
MKS1-209ENST00000580127 PRADC1Q9BSG0 188 aa12.06□□□□□ -0.48
MKS1-209ENST00000580127 LINC01556Q5JQF7 62 aa12.05□□□□□ -0.48
MKS1-209ENST00000580127 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms