RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 GNPNAT1Q96EK6 184 aaPredicted RBP16.02■□□□□ 0.16
VAPA-205ENST00000578314 HYLS1Q96M11 299 aa16.02■□□□□ 0.16
VAPA-205ENST00000578314 KLF12Q9Y4X4 402 aa16.02■□□□□ 0.16
VAPA-205ENST00000578314 KIAA1109Q2LD37 5005 aa16.02■□□□□ 0.15
VAPA-205ENST00000578314 H3BNG1 76 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 SPINK4O60575 86 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 ATP6V0CP27449 155 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 CCL18P55774 89 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 SERF2P84101 59 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 CMTM2Q8TAZ6 248 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 TMPRSS5Q9H3S3 457 aa16.01■□□□□ 0.15
VAPA-205ENST00000578314 HMGB3O15347 200 aaKnown RBP16■□□□□ 0.15
VAPA-205ENST00000578314 STAG3L2P0CL84 134 aa16■□□□□ 0.15
VAPA-205ENST00000578314 STAG3L3P0CL85 134 aa16■□□□□ 0.15
VAPA-205ENST00000578314 CDC34P49427 236 aaPredicted RBP16■□□□□ 0.15
VAPA-205ENST00000578314 RGS21Q2M5E4 152 aa16■□□□□ 0.15
VAPA-205ENST00000578314 INO80EQ8NBZ0 244 aaPredicted RBP16■□□□□ 0.15
VAPA-205ENST00000578314 ZNRF2Q8NHG8 242 aa16■□□□□ 0.15
VAPA-205ENST00000578314 TRGV2A0A075B6R0 118 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 TRGV1A0A0A0MS02 117 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 MBP02144 154 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 Q6AWC8 147 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 SUN5Q8TC36 379 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 LINC00588Q9Y4M8 146 aa15.99■□□□□ 0.15
VAPA-205ENST00000578314 A0A0J9YY99 117 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 RNF222A6NCQ9 220 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 ARL14EPLP0DKL9 152 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 RAB24Q969Q5 203 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 ARPC5LQ9BPX5 153 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 TNFSF18Q9UNG2 199 aa15.98■□□□□ 0.15
VAPA-205ENST00000578314 PKHD1P08F94 4074 aa15.97■□□□□ 0.15
VAPA-205ENST00000578314 A0A1B0GVY2 172 aa15.97■□□□□ 0.15
VAPA-205ENST00000578314 GOLT1AQ6ZVE7 132 aa15.97■□□□□ 0.15
VAPA-205ENST00000578314 OR2T35Q8NGX2 323 aa15.97■□□□□ 0.15
VAPA-205ENST00000578314 NACAE9PAV3 2078 aa15.96■□□□□ 0.15
VAPA-205ENST00000578314 PRSS29PA6NIE9 313 aa15.96■□□□□ 0.15
VAPA-205ENST00000578314 ST6GAL2Q96JF0 529 aa15.96■□□□□ 0.15
VAPA-205ENST00000578314 SH3BGRL3Q9H299 93 aa15.96■□□□□ 0.15
VAPA-205ENST00000578314 PKD1P98161 4303 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 FXYD6-FXYD2A0A087WZ82 144 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 MUC21Q5SSG8 566 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 RPL7L1Q6DKI1 246 aaKnown RBP15.95■□□□□ 0.14
VAPA-205ENST00000578314 SSX7Q7RTT5 188 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 VSIG2Q96IQ7 327 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 RPH3ALQ9UNE2 315 aa15.95■□□□□ 0.14
VAPA-205ENST00000578314 GCHFRP30047 84 aa15.94■□□□□ 0.14
VAPA-205ENST00000578314 ZNF415Q09FC8 603 aa15.94■□□□□ 0.14
VAPA-205ENST00000578314 SOHLH1Q5JUK2 328 aa15.94■□□□□ 0.14
VAPA-205ENST00000578314 C1orf134Q5TEV5 83 aa15.94■□□□□ 0.14
VAPA-205ENST00000578314 BORCS7-ASMTA0A0B4J1R7 106 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 NBDYA0A0U1RRE5 68 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 G3V3Q6 166 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 GNG5P63218 68 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 TDRG1Q3Y452 100 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 FAM159AQ6UWV7 190 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 TVP23CQ96ET8 276 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 KRTAP17-1Q9BYP8 105 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 ACTR3CQ9C0K3 210 aaPredicted RBP15.93■□□□□ 0.14
VAPA-205ENST00000578314 MRPL16Q9NX20 251 aaKnown RBP15.93■□□□□ 0.14
VAPA-205ENST00000578314 MDFICQ9P1T7 246 aa15.93■□□□□ 0.14
VAPA-205ENST00000578314 DYNC1H1Q14204 4646 aaKnown RBP15.93■□□□□ 0.14
VAPA-205ENST00000578314 TRAV8-1A0A0A6YYK1 113 aa15.92■□□□□ 0.14
VAPA-205ENST00000578314 SERTM2A0A1B0GWG4 89 aa15.92■□□□□ 0.14
VAPA-205ENST00000578314 CXorf1O96002 111 aa15.92■□□□□ 0.14
VAPA-205ENST00000578314 ESRGQ1W209 222 aa15.92■□□□□ 0.14
VAPA-205ENST00000578314 TMEM167BQ9NRX6 74 aa15.92■□□□□ 0.14
VAPA-205ENST00000578314 C5orf17Q8NAS9 161 aa15.91■□□□□ 0.14
VAPA-205ENST00000578314 SPXQ9BT56 116 aa15.91■□□□□ 0.14
VAPA-205ENST00000578314 TREM1Q9NP99 234 aa15.91■□□□□ 0.14
VAPA-205ENST00000578314 DNAH11Q96DT5 4516 aa15.91■□□□□ 0.14
VAPA-205ENST00000578314 TRGV11A0A075B6L2 103 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 TRAV21A0A0B4J279 112 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 TCRAP04437 139 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 TMEM183BQ1AE95 376 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 TMEM183AQ8IXX5 376 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 UPK3BQ9BT76 320 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 Q9H8V8 135 aa15.9■□□□□ 0.14
VAPA-205ENST00000578314 A0A096LPF7 62 aa15.89■□□□□ 0.13
VAPA-205ENST00000578314 RASL10AQ92737 203 aa15.89■□□□□ 0.13
VAPA-205ENST00000578314 PCLOQ9Y6V0 5065 aa15.89■□□□□ 0.13
VAPA-205ENST00000578314 TAAR5O14804 337 aa15.88■□□□□ 0.13
VAPA-205ENST00000578314 IGHV3-53P01767 116 aa15.88■□□□□ 0.13
VAPA-205ENST00000578314 SUMO1P63165 101 aaKnown RBP15.88■□□□□ 0.13
VAPA-205ENST00000578314 SLAQ13239 276 aa15.88■□□□□ 0.13
VAPA-205ENST00000578314 PRO0255Q9UI72 69 aa15.88■□□□□ 0.13
VAPA-205ENST00000578314 GGTLC3B5MD39 225 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 F6UZH7 168 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 PAX4O43316 350 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 FHL2Q14192 279 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 ZNF726P1Q15940 193 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 SGK494Q96LW2 274 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 NAGKQ9UJ70 344 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 EPDR1Q9UM22 224 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 MRPS16Q9Y3D3 137 aaKnown RBP15.87■□□□□ 0.13
VAPA-205ENST00000578314 MUC4Q99102 2169 aa15.87■□□□□ 0.13
VAPA-205ENST00000578314 A0A1W2PRE2 83 aa15.86■□□□□ 0.13
VAPA-205ENST00000578314 K7EQM0 130 aa15.86■□□□□ 0.13
VAPA-205ENST00000578314 GNRH2O43555 120 aa15.86■□□□□ 0.13
VAPA-205ENST00000578314 IQCF2Q8IXL9 164 aa15.86■□□□□ 0.13
VAPA-205ENST00000578314 NDFIP1Q9BT67 221 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms