RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 PRR9Q5T870 116 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 Q6ZR54 194 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 SSX7Q7RTT5 188 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
SF3B3-215ENST00000577085 H3BNG1 76 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 RTL8CO15255 209 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 GIPP09681 153 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-215ENST00000577085 MUC21Q5SSG8 566 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 FAM159AQ6UWV7 190 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 NAGKQ9UJ70 344 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 TP53TG3Q9ULZ0 132 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
SF3B3-215ENST00000577085 SPINK4O60575 86 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 GOLT1AQ6ZVE7 132 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 OR2G3Q8NGZ4 309 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 ZNRF2Q8NHG8 242 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 TMED6Q8WW62 240 aa10.82□□□□□ -0.68
SF3B3-215ENST00000577085 PSMG3Q9BT73 122 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-215ENST00000577085 MRPL16Q9NX20 251 aaKnown RBP10.82□□□□□ -0.68
SF3B3-215ENST00000577085 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 BORCS7-ASMTA0A0B4J1R7 106 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 ATP6V0CP27449 155 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 SERF2P84101 59 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 Q6ZQT7 251 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
SF3B3-215ENST00000577085 TRGV11A0A075B6L2 103 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 K7EQM0 130 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 IQCF2Q8IXL9 164 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 ARL6IP6Q8N6S5 226 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 RAB24Q969Q5 203 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 ST6GAL2Q96JF0 529 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 NDFIP1Q9BT67 221 aa10.8□□□□□ -0.68
SF3B3-215ENST00000577085 ACTR3CQ9C0K3 210 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-215ENST00000577085 CXorf1O96002 111 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 STAG3L2P0CL84 134 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 STAG3L3P0CL85 134 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 TMEM183BQ1AE95 376 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 Q5BKY6 102 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 Q6AWC8 147 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 OR2T35Q8NGX2 323 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 Q9H8V8 135 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 TREM1Q9NP99 234 aa10.79□□□□□ -0.68
SF3B3-215ENST00000577085 HECTD4Q9Y4D8 3996 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 TRAV21A0A0B4J279 112 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 SERTM2A0A1B0GWG4 89 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 PAX4O43316 350 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 GCHFRP30047 84 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 GNG5P63218 68 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 SLAQ13239 276 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 SH3BGRL3Q9H299 93 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 TMEM167BQ9NRX6 74 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 TNFSF18Q9UNG2 199 aa10.78□□□□□ -0.68
SF3B3-215ENST00000577085 NACAE9PAV3 2078 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 F6UZH7 168 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 ESRGQ1W209 222 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 C6orf223Q8N319 242 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 C5orf17Q8NAS9 161 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 SPXQ9BT56 116 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 MDFICQ9P1T7 246 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 PRO0255Q9UI72 69 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 HHLA3Q9XRX5 114 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
SF3B3-215ENST00000577085 A0A1B0GVY2 172 aa10.76□□□□□ -0.69
SF3B3-215ENST00000577085 ZFP69Q49AA0 526 aa10.76□□□□□ -0.69
SF3B3-215ENST00000577085 RPL7L1Q6DKI1 246 aaKnown RBP10.76□□□□□ -0.69
SF3B3-215ENST00000577085 VSIG2Q96IQ7 327 aa10.76□□□□□ -0.69
SF3B3-215ENST00000577085 SDF2L1Q9HCN8 221 aa10.76□□□□□ -0.69
SF3B3-215ENST00000577085 MRPS16Q9Y3D3 137 aaKnown RBP10.76□□□□□ -0.69
SF3B3-215ENST00000577085 A0A096LPF7 62 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 RNF222A6NCQ9 220 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 TCRAP04437 139 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 PCNPQ8WW12 178 aaKnown RBP10.75□□□□□ -0.69
SF3B3-215ENST00000577085 KCNS1Q96KK3 526 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 SGK494Q96LW2 274 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 C8orf49Q96NF6 230 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
SF3B3-215ENST00000577085 SUMO1P63165 101 aaKnown RBP10.74□□□□□ -0.69
SF3B3-215ENST00000577085 TDRG1Q3Y452 100 aa10.74□□□□□ -0.69
SF3B3-215ENST00000577085 AKR1C8PQ5T2L2 129 aa10.74□□□□□ -0.69
SF3B3-215ENST00000577085 UPK3BQ9BT76 320 aa10.74□□□□□ -0.69
SF3B3-215ENST00000577085 TAAR5O14804 337 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 ARPC5O15511 151 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 GNRH2O43555 120 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 CRYBA4P53673 196 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
SF3B3-215ENST00000577085 PRNTQ86SH4 94 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 CYB561D1Q8N8Q1 229 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 RASL10AQ92737 203 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 EPDR1Q9UM22 224 aa10.73□□□□□ -0.69
SF3B3-215ENST00000577085 CTXND1A0A1B0GTU2 59 aa10.72□□□□□ -0.69
SF3B3-215ENST00000577085 FBLL1A6NHQ2 334 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms