RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 H3BNG1 76 aa13.5□□□□□ -0.25
TNFRSF12A-205ENST00000574699 OR2G3Q8NGZ4 309 aa13.5□□□□□ -0.25
TNFRSF12A-205ENST00000574699 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
TNFRSF12A-205ENST00000574699 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
TNFRSF12A-205ENST00000574699 PSMG3Q9BT73 122 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF12A-205ENST00000574699 CDC34P49427 236 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 ARL6IP6Q8N6S5 226 aa13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 INO80EQ8NBZ0 244 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 RPH3ALQ9UNE2 315 aa13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 LINC00588Q9Y4M8 146 aa13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 KLF12Q9Y4X4 402 aa13.49□□□□□ -0.25
TNFRSF12A-205ENST00000574699 MUC4Q99102 2169 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 HMGB3O15347 200 aaKnown RBP13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 SPINK4O60575 86 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 MBP02144 154 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 C1orf134Q5TEV5 83 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 Q6ZQT7 251 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 SSX7Q7RTT5 188 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 TP53TG3Q9ULZ0 132 aa13.48□□□□□ -0.25
TNFRSF12A-205ENST00000574699 ARL14EPLP0DKL9 152 aa13.47□□□□□ -0.25
TNFRSF12A-205ENST00000574699 ATP6V0CP27449 155 aa13.47□□□□□ -0.25
TNFRSF12A-205ENST00000574699 SERF2P84101 59 aa13.47□□□□□ -0.25
TNFRSF12A-205ENST00000574699 Q5BKY6 102 aa13.46□□□□□ -0.25
TNFRSF12A-205ENST00000574699 MUC21Q5SSG8 566 aa13.46□□□□□ -0.25
TNFRSF12A-205ENST00000574699 Q6AWC8 147 aa13.46□□□□□ -0.25
TNFRSF12A-205ENST00000574699 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.25
TNFRSF12A-205ENST00000574699 FXYD6-FXYD2A0A087WZ82 144 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 NBDYA0A0U1RRE5 68 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 A0A1B0GVY2 172 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 STAG3L2P0CL84 134 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 RGS21Q2M5E4 152 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 FAM159AQ6UWV7 190 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 RAB24Q969Q5 203 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 ST6GAL2Q96JF0 529 aa13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 MRPL16Q9NX20 251 aaKnown RBP13.45□□□□□ -0.26
TNFRSF12A-205ENST00000574699 BORCS7-ASMTA0A0B4J1R7 106 aa13.44□□□□□ -0.26
TNFRSF12A-205ENST00000574699 OR2T35Q8NGX2 323 aa13.44□□□□□ -0.26
TNFRSF12A-205ENST00000574699 DNAH2Q9P225 4427 aa13.44□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TRGV11A0A075B6L2 103 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 GCHFRP30047 84 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TMEM183BQ1AE95 376 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TMEM183AQ8IXX5 376 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 VSIG2Q96IQ7 327 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 SH3BGRL3Q9H299 93 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TNFSF18Q9UNG2 199 aa13.43□□□□□ -0.26
TNFRSF12A-205ENST00000574699 RNF222A6NCQ9 220 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 GNG5P63218 68 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 C5orf17Q8NAS9 161 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 NDFIP1Q9BT67 221 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 ACTR3CQ9C0K3 210 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 Q9H8V8 135 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TREM1Q9NP99 234 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 NAGKQ9UJ70 344 aa13.42□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TRAV8-1A0A0A6YYK1 113 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TRAV21A0A0B4J279 112 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 K7EQM0 130 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 PAX4O43316 350 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 CXorf1O96002 111 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 IGHV3-53P01767 116 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 SLAQ13239 276 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 ESRGQ1W209 222 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TDRG1Q3Y452 100 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 RPL7L1Q6DKI1 246 aaKnown RBP13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 SUN5Q8TC36 379 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 SPXQ9BT56 116 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 UPK3BQ9BT76 320 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 MDFICQ9P1T7 246 aa13.41□□□□□ -0.26
TNFRSF12A-205ENST00000574699 A0A096LPF7 62 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 F6UZH7 168 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TTC32Q5I0X7 151 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 C6orf223Q8N319 242 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 PRO0255Q9UI72 69 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 MRPS16Q9Y3D3 137 aaKnown RBP13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 ICOSQ9Y6W8 199 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 FAT2Q9NYQ8 4349 aa13.4□□□□□ -0.26
TNFRSF12A-205ENST00000574699 TCRAP04437 139 aa13.39□□□□□ -0.27
TNFRSF12A-205ENST00000574699 DNAH17Q9UFH2 4485 aa13.39□□□□□ -0.27
TNFRSF12A-205ENST00000574699 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
TNFRSF12A-205ENST00000574699 TVP23CQ96ET8 276 aa13.38□□□□□ -0.27
TNFRSF12A-205ENST00000574699 TRGV4A0A0C4DH28 118 aa13.37□□□□□ -0.27
TNFRSF12A-205ENST00000574699 RASL10AQ92737 203 aa13.37□□□□□ -0.27
TNFRSF12A-205ENST00000574699 KCNS1Q96KK3 526 aa13.37□□□□□ -0.27
TNFRSF12A-205ENST00000574699 SDF2L1Q9HCN8 221 aa13.37□□□□□ -0.27
TNFRSF12A-205ENST00000574699 HHLA3Q9XRX5 114 aa13.37□□□□□ -0.27
TNFRSF12A-205ENST00000574699 GGTLC3B5MD39 225 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 TAAR5O14804 337 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 CRYBA4P53673 196 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 SUMO1P63165 101 aaKnown RBP13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 FHL2Q14192 279 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 C8orf49Q96NF6 230 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 EPDR1Q9UM22 224 aa13.36□□□□□ -0.27
TNFRSF12A-205ENST00000574699 IGHV3-16A0A0C4DH30 117 aa13.35□□□□□ -0.27
TNFRSF12A-205ENST00000574699 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
TNFRSF12A-205ENST00000574699 A0A1W2PPQ1 181 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms