RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 NDFIP1Q9BT67 221 aa17.78■□□□□ 0.44
ATPAF1-213ENST00000574428 MLST8Q9BVC4 326 aa17.78■□□□□ 0.44
ATPAF1-213ENST00000574428 PPP1R2P9O14990 202 aa17.77■□□□□ 0.44
ATPAF1-213ENST00000574428 AGRNO00468 2067 aa17.77■□□□□ 0.44
ATPAF1-213ENST00000574428 KRTAP10-11P60412 298 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 SAPCD1Q5SSQ6 148 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 ZFP82Q8N141 532 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 ZC2HC1AQ96GY0 325 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 PPP1R14DQ9NXH3 145 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 C1orf196B1AJZ1 125 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 OR5I1Q13606 314 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 DEFB125Q8N687 156 aa17.76■□□□□ 0.43
ATPAF1-213ENST00000574428 TRBV24-1A0A075B6N3 115 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 RBMY1BA6NDE4 496 aaKnown RBP17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 RBMY1EA6NEQ0 496 aaKnown RBP17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 RBMY1DP0C7P1 496 aaKnown RBP17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 S100PP25815 95 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 RPS10P46783 165 aaKnown RBP17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 EGFEM1PQ0D2K5 195 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 PRR27Q6MZM9 219 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 OR10G8Q8NGN5 311 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 FAM210BQ96KR6 192 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 FAM19A4Q96LR4 140 aa17.75■□□□□ 0.43
ATPAF1-213ENST00000574428 J3KRW8 73 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 AMTNQ6UX39 209 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 STHQ8IWL8 128 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 SMIM12Q96EX1 92 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 LENEPQ9Y5L5 61 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 RAB5BP61020 215 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 SAMD5Q5TGI4 173 aa17.74■□□□□ 0.43
ATPAF1-213ENST00000574428 A8MTW9 85 aa17.73■□□□□ 0.43
ATPAF1-213ENST00000574428 GCGP01275 180 aa17.73■□□□□ 0.43
ATPAF1-213ENST00000574428 PRR9Q5T870 116 aa17.73■□□□□ 0.43
ATPAF1-213ENST00000574428 ZFAND2AQ8N6M9 145 aa17.73■□□□□ 0.43
ATPAF1-213ENST00000574428 PYGO2Q9BRQ0 406 aa17.73■□□□□ 0.43
ATPAF1-213ENST00000574428 KIR3DS1Q14943 382 aa17.72■□□□□ 0.43
ATPAF1-213ENST00000574428 TRPT1Q86TN4 253 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-213ENST00000574428 Q8N1Y9 231 aa17.72■□□□□ 0.43
ATPAF1-213ENST00000574428 ODF3Q96PU9 254 aa17.72■□□□□ 0.43
ATPAF1-213ENST00000574428 M0R2Z0 102 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 ZNF80P51504 273 aaPredicted RBP17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 FXYD7P58549 80 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 SPINK13Q1W4C9 94 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 SMUG1Q53HV7 270 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 LINC00322Q6ZN03 302 aaPredicted RBP17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 CRISP2P16562 243 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 ERVFC1-1P60608 527 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 COX8CQ7Z4L0 72 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 IMMP2LQ96T52 175 aa17.71■□□□□ 0.43
ATPAF1-213ENST00000574428 TRBV7-9A0A0J9YWB2 115 aa17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 A0A1W2PPQ1 181 aa17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 LEPP41159 167 aa17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 CRIP1P50238 77 aa17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 KCNIP4Q6PIL6 250 aa17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 RNASE7Q9H1E1 156 aaKnown RBP17.7■□□□□ 0.42
ATPAF1-213ENST00000574428 GPX1P07203 203 aa17.69■□□□□ 0.42
ATPAF1-213ENST00000574428 FAM3BP58499 235 aaPredicted RBP17.69■□□□□ 0.42
ATPAF1-213ENST00000574428 RPL35AP18077 110 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 RNASE4P34096 147 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 SRD5A3Q9H8P0 318 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 V9GYV3 84 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 TRAV12-2A0A075B6T6 113 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 KLLNB2CW77 178 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 CDKN1BP46527 198 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 Q6ZQT7 251 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 CLUHP3Q96NS8 147 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 OSTCQ9NRP0 149 aa17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 ZMAT5Q9UDW3 170 aaKnown RBP17.68■□□□□ 0.42
ATPAF1-213ENST00000574428 TSPOP30536 169 aa17.67■□□□□ 0.42
ATPAF1-213ENST00000574428 BIN3Q9NQY0 253 aa17.67■□□□□ 0.42
ATPAF1-213ENST00000574428 SH2D1AO60880 128 aa17.66■□□□□ 0.42
ATPAF1-213ENST00000574428 FAM162BQ5T6X4 162 aa17.66■□□□□ 0.42
ATPAF1-213ENST00000574428 IL36BQ9NZH7 164 aa17.66■□□□□ 0.42
ATPAF1-213ENST00000574428 IBA57Q5T440 356 aaKnown RBP17.66■□□□□ 0.42
ATPAF1-213ENST00000574428 GFI1BQ5VTD9 330 aa17.66■□□□□ 0.42
ATPAF1-213ENST00000574428 C19orf71A6NCJ1 209 aa17.65■□□□□ 0.42
ATPAF1-213ENST00000574428 TRGC2P03986 189 aa17.64■□□□□ 0.41
ATPAF1-213ENST00000574428 NUDT10Q8NFP7 164 aa17.64■□□□□ 0.41
ATPAF1-213ENST00000574428 DAZAP1Q96EP5 407 aaKnown RBP17.64■□□□□ 0.41
ATPAF1-213ENST00000574428 NUDT11Q96G61 164 aa17.64■□□□□ 0.41
ATPAF1-213ENST00000574428 MGAM2Q2M2H8 2515 aa17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 TRAV12-3A0A0B4J271 114 aa17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 C7orf71A4D174 169 aa17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 CRXO43186 299 aaPredicted RBP17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 TYMSP04818 313 aa17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 FAM231DQ6ZW35 169 aa17.63■□□□□ 0.41
ATPAF1-213ENST00000574428 FABP5P3A8MUU1 101 aa17.62■□□□□ 0.41
ATPAF1-213ENST00000574428 P01737 135 aa17.62■□□□□ 0.41
ATPAF1-213ENST00000574428 XCL2Q9UBD3 114 aa17.62■□□□□ 0.41
ATPAF1-213ENST00000574428 NUTF2P61970 127 aaKnown RBP17.61■□□□□ 0.41
ATPAF1-213ENST00000574428 Q6AWC8 147 aa17.61■□□□□ 0.41
ATPAF1-213ENST00000574428 TRAV21A0A0B4J279 112 aa17.61■□□□□ 0.41
ATPAF1-213ENST00000574428 RPL19P84098 196 aaKnown RBP17.61■□□□□ 0.41
ATPAF1-213ENST00000574428 C11orf21Q9P2W6 132 aa17.61■□□□□ 0.41
ATPAF1-213ENST00000574428 NOTCH1P46531 2555 aa17.6■□□□□ 0.41
ATPAF1-213ENST00000574428 ZNF705GA8MUZ8 300 aaPredicted RBP17.6■□□□□ 0.41
ATPAF1-213ENST00000574428 PHOX2AO14813 284 aa17.6■□□□□ 0.41
ATPAF1-213ENST00000574428 IGHV4-30-4P0DP06 118 aa17.6■□□□□ 0.41
ATPAF1-213ENST00000574428 BTF3L4Q96K17 158 aa17.6■□□□□ 0.41
ATPAF1-213ENST00000574428 TRAV9-1A0A075B6T8 112 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms