RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 HIST1H1AQ02539 215 aaPredicted RBP13.78□□□□□ -0.2
SMPD3-211ENST00000568373 SMPXQ9UHP9 88 aa13.78□□□□□ -0.2
SMPD3-211ENST00000568373 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.2
SMPD3-211ENST00000568373 CHCHD1Q96BP2 118 aaKnown RBP13.77□□□□□ -0.21
SMPD3-211ENST00000568373 ITPR3Q14573 2671 aa13.77□□□□□ -0.21
SMPD3-211ENST00000568373 M0QZ24 198 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 M0R2Z0 102 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 RPLP1P05386 114 aaKnown RBP13.76□□□□□ -0.21
SMPD3-211ENST00000568373 PDZD2O15018 2839 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 SSTP61278 116 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 FOXE3Q13461 319 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 TEX43Q6ZNM6 134 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 LENEPQ9Y5L5 61 aa13.76□□□□□ -0.21
SMPD3-211ENST00000568373 MUC21A0A0G2JKD1 596 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 MUC21A0A140T8X8 626 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 OVOL1O14753 267 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 Q8N976 141 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 CNFNQ9BYD5 112 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 UFC1Q9Y3C8 167 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 ELANEP08246 267 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 LINC00614P0C842 121 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 C3orf79P0CE67 100 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 MYOZ3Q8TDC0 251 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 LINC00477Q96M19 166 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 TLN2Q9Y4G6 2542 aa13.75□□□□□ -0.21
SMPD3-211ENST00000568373 TWIST1Q15672 202 aa13.74□□□□□ -0.21
SMPD3-211ENST00000568373 FAM104BQ5XKR9 115 aa13.74□□□□□ -0.21
SMPD3-211ENST00000568373 OR10J6PQ8NGY7 276 aa13.74□□□□□ -0.21
SMPD3-211ENST00000568373 FLNBO75369 2602 aaKnown RBP13.74□□□□□ -0.21
SMPD3-211ENST00000568373 FAM181BA6NEQ2 426 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 EDN2P20800 178 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 DEFA6Q01524 100 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 WFDC11Q8NEX6 87 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 IGKV3-7A0A075B6H7 116 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 KIR2DL5BA0A0G2JN68 375 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 KIR2DL5BA0A0G2JPC4 375 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 AMN1Q8IY45 258 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 KIR2DL5AQ8N109 375 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 CCDC168Q8NDH2 2452 aa13.73□□□□□ -0.21
SMPD3-211ENST00000568373 LGALS1P09382 135 aaKnown RBP13.72□□□□□ -0.21
SMPD3-211ENST00000568373 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
SMPD3-211ENST00000568373 IGHV1-24A0A0C4DH33 117 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 RNF152Q8N8N0 203 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 U3KQK5 164 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 D6R8Y8 96 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 PRR9Q5T870 116 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 Q8N2B8 174 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 SELENOKQ9Y6D0 94 aa13.71□□□□□ -0.21
SMPD3-211ENST00000568373 CSN3P07498 182 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 DEFB1P60022 68 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 SAMD13Q5VXD3 122 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 ZFAND2AQ8N6M9 145 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 OR8A1Q8NGG7 326 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 TMEM191AQ9H0A3 160 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 AKAP9Q99996 3911 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 SRD5A1P18405 259 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 MRPL51Q4U2R6 128 aaKnown RBP13.7□□□□□ -0.22
SMPD3-211ENST00000568373 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 C14orf144Q96I85 54 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 VAMP8Q9BV40 100 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 MSRB1Q9NZV6 116 aa13.7□□□□□ -0.22
SMPD3-211ENST00000568373 MYO9AB2RTY4 2548 aa13.69□□□□□ -0.22
SMPD3-211ENST00000568373 C2orf70A6NJV1 201 aa13.69□□□□□ -0.22
SMPD3-211ENST00000568373 Q6ZQT7 251 aa13.69□□□□□ -0.22
SMPD3-211ENST00000568373 REC114Q7Z4M0 266 aa13.69□□□□□ -0.22
SMPD3-211ENST00000568373 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
SMPD3-211ENST00000568373 F6UB75 175 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 RAB4AP20338 218 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 FLNAP21333 2647 aaKnown RBP13.68□□□□□ -0.22
SMPD3-211ENST00000568373 TEX29Q8N6K0 151 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 FAM19A4Q96LR4 140 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 PRELID3AQ96N28 172 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 IGHV4OR15-8A0A075B7B6 117 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 A0A087WW49 117 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 BTF3P20290 206 aaKnown RBP13.68□□□□□ -0.22
SMPD3-211ENST00000568373 ID1P41134 155 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 NDUFAF3Q9BU61 184 aa13.68□□□□□ -0.22
SMPD3-211ENST00000568373 LGALS9O00182 355 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 C20orf144Q9BQM9 153 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 PAM16Q9Y3D7 125 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 BAHCC1Q9P281 2608 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 TRBV7-9A0A0J9YWB2 115 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 OR5AL1P0C617 328 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 PRSS3P2Q8NHM4 247 aa13.67□□□□□ -0.22
SMPD3-211ENST00000568373 SONP18583 2426 aaKnown RBP13.66□□□□□ -0.22
SMPD3-211ENST00000568373 TRAV21A0A0B4J279 112 aa13.66□□□□□ -0.22
SMPD3-211ENST00000568373 J3KRW8 73 aa13.66□□□□□ -0.22
SMPD3-211ENST00000568373 LEPROTL1O95214 131 aa13.66□□□□□ -0.22
SMPD3-211ENST00000568373 CKS2P33552 79 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms