RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 PEMTQ9UBM1 199 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 PSG8Q9UQ74 426 aa4.26□□□□□ -1.73
LINC01541-202ENST00000568095 TIMM8BQ9Y5J9 83 aaPredicted RBP4.26□□□□□ -1.73
LINC01541-202ENST00000568095 DSCAMO60469 2012 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 IGLV2-18A0A075B6J9 118 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 TMEM213A2RRL7 107 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 CRYGBP07316 175 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 IGLC6P0CF74 106 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 EXOC3-AS1Q8N2X6 119 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 LINC00311Q8N616 119 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 OR4C13Q8NGP0 309 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 ARFGEF3Q5TH69 2177 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 ATP5LO75964 103 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 GYPEP15421 78 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 GLRXP35754 106 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 DUX4L9Q6RFH8 374 aaPredicted RBP4.25□□□□□ -1.73
LINC01541-202ENST00000568095 Q6ZUT4 128 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 FLYWCH2Q96CP2 140 aaKnown RBP4.25□□□□□ -1.73
LINC01541-202ENST00000568095 TTTY13Q9BZ97 58 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 ZNRD1Q9P1U0 126 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 FZR1Q9UM11 496 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 HIGD1AQ9Y241 93 aa4.25□□□□□ -1.73
LINC01541-202ENST00000568095 DPM2O94777 84 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 CNIH1O95406 144 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 AVPP01185 164 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 IGHV3-48P01763 117 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 IGHG4P01861 327 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 FXYD7P58549 80 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 MRPL23Q16540 153 aaKnown RBP4.24□□□□□ -1.73
LINC01541-202ENST00000568095 C10orf55Q5SWW7 151 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 TEX36Q5VZQ5 186 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 SVEP1Q4LDE5 3571 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 H3BRN7 92 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 H3BTX0 84 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 XGP55808 180 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 TCTAP57738 103 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 RNASE6Q93091 150 aaKnown RBP4.24□□□□□ -1.73
LINC01541-202ENST00000568095 SHANK2-AS3Q9BTD1 123 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 PLCE1Q9P212 2302 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 CACNA1DQ01668 2161 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 APOMO95445 188 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 SPINK8P0C7L1 97 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 ZNF672Q499Z4 452 aaPredicted RBP4.24□□□□□ -1.73
LINC01541-202ENST00000568095 SYT8Q8NBV8 401 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 GLMPQ8WWB7 406 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 CARD19Q96LW7 228 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 C8orf49Q96NF6 230 aa4.24□□□□□ -1.73
LINC01541-202ENST00000568095 BBC3Q96PG8 261 aaPredicted RBP4.24□□□□□ -1.73
LINC01541-202ENST00000568095 NXT2Q9NPJ8 142 aaKnown RBP4.24□□□□□ -1.73
LINC01541-202ENST00000568095 COL6A6A6NMZ7 2263 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 CADP27708 2225 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 CSMD1Q96PZ7 3565 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 COL12A1Q99715 3063 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 M0QXV9 152 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 GATA3P23771 443 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 CKS2P33552 79 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 FBN2P35556 2912 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 LEPP41159 167 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 UBE2D3P61077 147 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 UBE2D2P62837 147 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 BSPH1Q075Z2 132 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 TWIST1Q15672 202 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 AMTNQ6UX39 209 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 GTSCR1Q86UQ5 136 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 RNF183Q96D59 192 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 MAP1LC3AQ9H492 121 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 I3L2K1 104 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 M0R1B8 84 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 SH2D1AO60880 128 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 PDE6HQ13956 83 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 Q8N8P6 123 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 ITLN2Q8WWU7 325 aaPredicted RBP4.23□□□□□ -1.73
LINC01541-202ENST00000568095 C17orf77Q96MU5 243 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 TPSG1Q9NRR2 321 aa4.23□□□□□ -1.73
LINC01541-202ENST00000568095 TNCP24821 2201 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 FLNCQ14315 2725 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 A0A087WX48 190 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 F8W735 103 aaPredicted RBP4.22□□□□□ -1.73
LINC01541-202ENST00000568095 SMKR1H3BMG3 65 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 FCN3O75636 299 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 NHLRC4P0CG21 123 aaPredicted RBP4.22□□□□□ -1.73
LINC01541-202ENST00000568095 UBE2D1P51668 147 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 IGFBPL1Q8WX77 278 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 RNF7Q9UBF6 113 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 PCNX1Q96RV3 2341 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 ACACBO00763 2458 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 K7EMI3 77 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 CCL21O00585 134 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 IGKV1-17P01599 117 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 RBP4P02753 201 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 SRD5A1P18405 259 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 FAM201AQ5SY85 155 aa4.22□□□□□ -1.73
LINC01541-202ENST00000568095 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms