RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 TMEM78Q5T7P6 136 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 TMUB2Q71RG4 321 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 TMEM167BQ9NRX6 74 aa9.34□□□□□ -0.91
COMMD4-214ENST00000566230 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 PLAC8L1A1L4L8 177 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 DIRC3C9JPN6 131 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 H7BYZ3 331 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 BCL2L11O43521 198 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 DEFB130BP0DP73 79 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 DEFB130AP0DP74 79 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
COMMD4-214ENST00000566230 GCHFRP30047 84 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 TAS2R60P59551 318 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 ERCC8Q13216 396 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 BAP18Q8IXM2 172 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 HYLS1Q96M11 299 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
COMMD4-214ENST00000566230 UMAD1C9J7I0 102 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 F5H768 121 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 PFDN1O60925 122 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
COMMD4-214ENST00000566230 C1QBP02746 253 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 CRISP2P16562 243 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 AZU1P20160 251 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF138P52744 262 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 TMED6Q8WW62 240 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 VGLL1Q99990 258 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF471Q9BX82 626 aaPredicted RBP9.32□□□□□ -0.92
COMMD4-214ENST00000566230 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
COMMD4-214ENST00000566230 A0A1W2PRE2 83 aa9.31□□□□□ -0.92
COMMD4-214ENST00000566230 KLLNB2CW77 178 aa9.31□□□□□ -0.92
COMMD4-214ENST00000566230 GPX1P07203 203 aa9.31□□□□□ -0.92
COMMD4-214ENST00000566230 CCL18P55774 89 aa9.31□□□□□ -0.92
COMMD4-214ENST00000566230 LGALSLQ3ZCW2 172 aaPredicted RBP9.31□□□□□ -0.92
COMMD4-214ENST00000566230 NKX6-2Q9C056 277 aaPredicted RBP9.31□□□□□ -0.92
COMMD4-214ENST00000566230 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-214ENST00000566230 SERTM2A0A1B0GWG4 89 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
COMMD4-214ENST00000566230 TPT1P13693 172 aaKnown RBP9.3□□□□□ -0.92
COMMD4-214ENST00000566230 SUMO1P63165 101 aaKnown RBP9.3□□□□□ -0.92
COMMD4-214ENST00000566230 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 GFI1BQ5VTD9 330 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 EIF5AL1Q6IS14 154 aaKnown RBP9.3□□□□□ -0.92
COMMD4-214ENST00000566230 SSX7Q7RTT5 188 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 AKAP14Q86UN6 197 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 STOML3Q8TAV4 291 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 PYGO2Q9BRQ0 406 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 Q9H8V8 135 aa9.3□□□□□ -0.92
COMMD4-214ENST00000566230 TRAV12-3A0A0B4J271 114 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 C7orf71A4D174 169 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 CBY3A6NI87 242 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 K7EQM0 130 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
COMMD4-214ENST00000566230 ATP5G1P05496 136 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 HTN1P15515 57 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
COMMD4-214ENST00000566230 ATP5G3P48201 142 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 DPPA3Q6W0C5 159 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 C16orf74Q96GX8 76 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 FAT1Q14517 4588 aa9.29□□□□□ -0.92
COMMD4-214ENST00000566230 J3KRW8 73 aa9.28□□□□□ -0.92
COMMD4-214ENST00000566230 MBD3L1Q8WWY6 194 aa9.28□□□□□ -0.92
COMMD4-214ENST00000566230 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
COMMD4-214ENST00000566230 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
COMMD4-214ENST00000566230 SRRM2Q9UQ35 2752 aaKnown RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 hCG_2014768A0A024R1R8 64 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 MAP1LC3B2A6NCE7 125 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 FBLL1A6NHQ2 334 aaKnown RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 TCRAP04437 139 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 BTF3P20290 206 aaKnown RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 CD300CQ08708 224 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 IQCF2Q8IXL9 164 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 ZFAND2AQ8N6M9 145 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 TMEM263Q8WUH6 116 aaKnown RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 MAP1LC3BQ9GZQ8 125 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 TMPRSS5Q9H3S3 457 aa9.27□□□□□ -0.93
COMMD4-214ENST00000566230 TIMM8BQ9Y5J9 83 aaPredicted RBP9.27□□□□□ -0.93
COMMD4-214ENST00000566230 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
COMMD4-214ENST00000566230 RAB5CP51148 216 aa9.26□□□□□ -0.93
COMMD4-214ENST00000566230 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
COMMD4-214ENST00000566230 SLC51BQ86UW2 128 aa9.26□□□□□ -0.93
COMMD4-214ENST00000566230 RNASE8Q8TDE3 154 aaKnown RBP9.26□□□□□ -0.93
COMMD4-214ENST00000566230 MYCBP2O75592 4640 aa9.25□□□□□ -0.93
COMMD4-214ENST00000566230 FHITP49789 147 aa9.25□□□□□ -0.93
COMMD4-214ENST00000566230 FGF8P55075 233 aaPredicted RBP9.25□□□□□ -0.93
COMMD4-214ENST00000566230 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
COMMD4-214ENST00000566230 EIF4E3Q8N5X7 224 aaKnown RBP9.25□□□□□ -0.93
COMMD4-214ENST00000566230 SFT2D1Q8WV19 159 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms