RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 S100A8P05109 93 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 CRISP2P16562 243 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 DEFB131AP59861 70 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 PRNTQ86SH4 94 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 STHQ8IWL8 128 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 LINC00479Q96M42 142 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 GNB1LQ9BYB4 327 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
SF3B3-207ENST00000566095 MAP6D1Q9H9H5 199 aa7.35□□□□□ -1.23
SF3B3-207ENST00000566095 IGKV2-40A0A087WW87 121 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-207ENST00000566095 A0A0J9YX75 114 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 A0A1W2PPQ1 181 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 IZUMO1RA6ND01 250 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 PGPEP1LA6NFU8 196 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 FABP5P3A8MUU1 101 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 ZNF705GA8MUZ8 300 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-207ENST00000566095 IGKV2D-40P01614 121 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-207ENST00000566095 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
SF3B3-207ENST00000566095 HLA-DRB4P13762 266 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 ZNF256Q9Y2P7 627 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-207ENST00000566095 HLA-DRB4X5D2U9 266 aa7.34□□□□□ -1.23
SF3B3-207ENST00000566095 TRAV34A0A0B4J273 112 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 A8MTW9 85 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-207ENST00000566095 HLA-DQA1P01909 254 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 IGLL1P15814 213 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 HLA-DMBP28068 263 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 IGFL4Q6B9Z1 124 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 MORN3Q6PF18 240 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-207ENST00000566095 FAM19A4Q96LR4 140 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 C1QTNF4Q9BXJ3 329 aa7.33□□□□□ -1.24
SF3B3-207ENST00000566095 F2Z2F3 143 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 RPS10P46783 165 aaKnown RBP7.32□□□□□ -1.24
SF3B3-207ENST00000566095 OR5I1Q13606 314 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
SF3B3-207ENST00000566095 ACTL10Q5JWF8 245 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 ZC2HC1AQ96GY0 325 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 CNFNQ9BYD5 112 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 AGPAT4-IT1Q9H0P7 198 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
SF3B3-207ENST00000566095 URGCP-MRPS24S4R325 110 aa7.32□□□□□ -1.24
SF3B3-207ENST00000566095 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 PHOX2AO14813 284 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 GPX1P07203 203 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 MED14OSP0DP75 135 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.31□□□□□ -1.24
SF3B3-207ENST00000566095 VGLL1Q99990 258 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 C20orf144Q9BQM9 153 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 SELENOKQ9Y6D0 94 aa7.31□□□□□ -1.24
SF3B3-207ENST00000566095 TRAV21A0A0B4J279 112 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 HIGD1CA8MV81 97 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 H3BMM0 161 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 CDKN1BP46527 198 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 ERCC8Q13216 396 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 ODF3L2Q3SX64 289 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 NEU1Q99519 415 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 MDFIQ99750 246 aa7.3□□□□□ -1.24
SF3B3-207ENST00000566095 AURKAIP1Q9NWT8 199 aaPredicted RBP7.3□□□□□ -1.24
SF3B3-207ENST00000566095 A0A1B0GXF2 115 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 KLLNB2CW77 178 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 S100A6P06703 90 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 CRIP1P50238 77 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 APOC4P55056 127 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 EGFEM1PQ0D2K5 195 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 PRR27Q6MZM9 219 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 NUP35Q8NFH5 326 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 Q8TAT8 98 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 FRZBQ92765 325 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 BORCS7Q96B45 105 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 KCNS1Q96KK3 526 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
SF3B3-207ENST00000566095 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
SF3B3-207ENST00000566095 DNHD1Q96M86 4753 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 IGHV4-4A0A075B6R2 117 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 A0A1B0GUT8 65 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 C7orf71A4D174 169 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 TMEM189A5PLL7 270 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 KNCNA6PVL3 124 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 F6UB75 175 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 INSP01308 110 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 TRGC2P03986 189 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 OR5AL1P0C617 328 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 CTRLP40313 264 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 HBBP68871 147 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 RIGQ13278 110 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 TDRG1Q3Y452 100 aa7.28□□□□□ -1.24
SF3B3-207ENST00000566095 LINC00322Q6ZN03 302 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-207ENST00000566095 ZNF493Q6ZR52 646 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms