RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 FAM19A4Q96LR4 140 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 ODF3Q96PU9 254 aa13.9□□□□□ -0.18
COMMD4-213ENST00000565834 H3BMM0 161 aa13.89□□□□□ -0.19
COMMD4-213ENST00000565834 FAM162BQ5T6X4 162 aa13.89□□□□□ -0.19
COMMD4-213ENST00000565834 TMEM242Q9NWH2 141 aa13.89□□□□□ -0.19
COMMD4-213ENST00000565834 ANK2Q01484 3957 aa13.89□□□□□ -0.19
COMMD4-213ENST00000565834 C19orf71A6NCJ1 209 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 CRISP2P16562 243 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 PRR31Q5SQ13 230 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 ZFAND2AQ8N6M9 145 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 NUDT10Q8NFP7 164 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 NUDT11Q96G61 164 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 ZNF705GA8MUZ8 300 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-213ENST00000565834 P01737 135 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 LEPP41159 167 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 CRIP1P50238 77 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 ZNF80P51504 273 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-213ENST00000565834 TMEM88Q6PEY1 159 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 CBLN2Q8IUK8 224 aa13.88□□□□□ -0.19
COMMD4-213ENST00000565834 A8MTW9 85 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 J3KRW8 73 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 GATCO43716 136 aaKnown RBP13.87□□□□□ -0.19
COMMD4-213ENST00000565834 SH2D1AO60880 128 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 GPX1P07203 203 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 KRTAP21-3Q3LHN1 58 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 GTSCR1Q86UQ5 136 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 SMCO4Q9NRQ5 59 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 V9GYV3 84 aa13.87□□□□□ -0.19
COMMD4-213ENST00000565834 TSPOP30536 169 aa13.86□□□□□ -0.19
COMMD4-213ENST00000565834 PRR9Q5T870 116 aa13.86□□□□□ -0.19
COMMD4-213ENST00000565834 AMTNQ6UX39 209 aa13.86□□□□□ -0.19
COMMD4-213ENST00000565834 STHQ8IWL8 128 aa13.86□□□□□ -0.19
COMMD4-213ENST00000565834 FABP5P3A8MUU1 101 aa13.85□□□□□ -0.19
COMMD4-213ENST00000565834 PFN1P07737 140 aaKnown RBP13.85□□□□□ -0.19
COMMD4-213ENST00000565834 RPP21Q9H633 154 aaKnown RBP13.85□□□□□ -0.19
COMMD4-213ENST00000565834 CXorf65A6NEN9 183 aa13.85□□□□□ -0.19
COMMD4-213ENST00000565834 KLLNB2CW77 178 aa13.85□□□□□ -0.19
COMMD4-213ENST00000565834 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
COMMD4-213ENST00000565834 M0R2Z0 102 aa13.84□□□□□ -0.19
COMMD4-213ENST00000565834 RNASE4P34096 147 aaKnown RBP13.84□□□□□ -0.19
COMMD4-213ENST00000565834 CDKN1BP46527 198 aa13.84□□□□□ -0.19
COMMD4-213ENST00000565834 SPINK13Q1W4C9 94 aa13.84□□□□□ -0.19
COMMD4-213ENST00000565834 CLUHP3Q96NS8 147 aa13.84□□□□□ -0.19
COMMD4-213ENST00000565834 PKD1L1Q8TDX9 2849 aa13.83□□□□□ -0.19
COMMD4-213ENST00000565834 RBMY1BA6NDE4 496 aaKnown RBP13.83□□□□□ -0.2
COMMD4-213ENST00000565834 RBMY1EA6NEQ0 496 aaKnown RBP13.83□□□□□ -0.2
COMMD4-213ENST00000565834 RBMY1DP0C7P1 496 aaKnown RBP13.83□□□□□ -0.2
COMMD4-213ENST00000565834 KIR3DS1Q14943 382 aa13.83□□□□□ -0.2
COMMD4-213ENST00000565834 OXLD1Q5BKU9 147 aa13.83□□□□□ -0.2
COMMD4-213ENST00000565834 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
COMMD4-213ENST00000565834 TUBA4BQ9H853 241 aa13.83□□□□□ -0.2
COMMD4-213ENST00000565834 CA1P00915 261 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-213ENST00000565834 CT83Q5H943 113 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 TRPT1Q86TN4 253 aaKnown RBP13.82□□□□□ -0.2
COMMD4-213ENST00000565834 IL36BQ9NZH7 164 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 URGCP-MRPS24S4R325 110 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 CMYA5Q8N3K9 4069 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 TRAV21A0A0B4J279 112 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 C7orf71A4D174 169 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 S100PP25815 95 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 Q6AWC8 147 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
COMMD4-213ENST00000565834 TMEM189A5PLL7 270 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 A8MWL6 223 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 ORM1P02763 201 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 FXYD7P58549 80 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 RPL19P84098 196 aaKnown RBP13.81□□□□□ -0.2
COMMD4-213ENST00000565834 GFI1BQ5VTD9 330 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 KCNIP4Q6PIL6 250 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 DNHD1Q96M86 4753 aa13.81□□□□□ -0.2
COMMD4-213ENST00000565834 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
COMMD4-213ENST00000565834 DEFB125Q8N687 156 aa13.8□□□□□ -0.2
COMMD4-213ENST00000565834 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
COMMD4-213ENST00000565834 LINC01559Q495D7 138 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 Q6ZQT7 251 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 TMSB15BA0A087X1C1 80 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 TRAV12-3A0A0B4J271 114 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 SMIM27A0A1W2PRY6 76 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 TCL1AP56279 114 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 NUTF2P61970 127 aaKnown RBP13.79□□□□□ -0.2
COMMD4-213ENST00000565834 C11orf21Q9P2W6 132 aa13.79□□□□□ -0.2
COMMD4-213ENST00000565834 FAM3BP58499 235 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-213ENST00000565834 RPS20P60866 119 aaKnown RBP13.78□□□□□ -0.2
COMMD4-213ENST00000565834 ELOBQ15370 118 aa13.78□□□□□ -0.2
COMMD4-213ENST00000565834 ZMAT5Q9UDW3 170 aaKnown RBP13.78□□□□□ -0.2
COMMD4-213ENST00000565834 NAGKQ9UJ70 344 aa13.78□□□□□ -0.2
COMMD4-213ENST00000565834 AMBPP02760 352 aa13.77□□□□□ -0.21
COMMD4-213ENST00000565834 EGFEM1PQ0D2K5 195 aa13.77□□□□□ -0.21
COMMD4-213ENST00000565834 YPEL4Q96NS1 127 aa13.77□□□□□ -0.21
COMMD4-213ENST00000565834 NEU1Q99519 415 aa13.77□□□□□ -0.21
COMMD4-213ENST00000565834 IGKV3D-20A0A0C4DH25 116 aa13.76□□□□□ -0.21
COMMD4-213ENST00000565834 A0A1W2PPQ1 181 aa13.76□□□□□ -0.21
COMMD4-213ENST00000565834 CRXO43186 299 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-213ENST00000565834 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-213ENST00000565834 GZMBP10144 247 aa13.76□□□□□ -0.21
COMMD4-213ENST00000565834 RPL35AP18077 110 aaKnown RBP13.76□□□□□ -0.21
COMMD4-213ENST00000565834 Q8N1Y9 231 aa13.76□□□□□ -0.21
COMMD4-213ENST00000565834 GFRA4Q9GZZ7 299 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms