RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 DTX2Q86UW9 622 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 ZNF575Q86XF7 245 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 GATD1Q8NB37 220 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 E7EQL1 145 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 PRRG2O14669 202 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 CEND1Q8N111 149 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 TNFRSF13BO14836 293 aaPredicted RBP15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SCGB2A2Q13296 93 aa15.93■□□□□ 0.14
MAP1LC3B-206ENST00000564844 IGLL5B9A064 214 aa15.92■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SPTBN4Q9H254 2564 aa15.92■□□□□ 0.14
MAP1LC3B-206ENST00000564844 DPM2O94777 84 aa15.92■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SPAG8Q99932 426 aaPredicted RBP15.92■□□□□ 0.14
MAP1LC3B-206ENST00000564844 NDPQ00604 133 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 PHLDA1Q8WV24 401 aaPredicted RBP15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 CFHR4Q92496 578 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 SMAD5-AS1Q9Y6J3 95 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 LYPD1Q8N2G4 141 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 CYSLTR1Q9Y271 337 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 FANCD2OSQ96PS1 177 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 NOTCH3Q9UM47 2321 aa15.91■□□□□ 0.14
MAP1LC3B-206ENST00000564844 MFAP4P55083 255 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 ASCL5Q7RTU5 278 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 TRBV6-1A0A0K0K1D8 114 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 TGFAP01135 160 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 IGHG4P01861 327 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 C21orf62Q9NYP8 219 aa15.9■□□□□ 0.14
MAP1LC3B-206ENST00000564844 C12orf74Q32Q52 190 aa15.89■□□□□ 0.13
MAP1LC3B-206ENST00000564844 NBR2O15453 112 aa15.89■□□□□ 0.13
MAP1LC3B-206ENST00000564844 IGLC6P0CF74 106 aa15.89■□□□□ 0.13
MAP1LC3B-206ENST00000564844 SPANXB1Q9NS25 103 aaPredicted RBP15.89■□□□□ 0.13
MAP1LC3B-206ENST00000564844 C11orf21Q9P2W6 132 aa15.89■□□□□ 0.13
MAP1LC3B-206ENST00000564844 FAM90A27PA6NNH2 459 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 GRNP28799 593 aaKnown RBP15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 C8orf31Q8N9H6 132 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 A0A1B0GWB2 263 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 FABP5P3A8MUU1 101 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 F8W735 103 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 FOXI2Q6ZQN5 318 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 MYOZ3Q8TDC0 251 aa15.88■□□□□ 0.13
MAP1LC3B-206ENST00000564844 CD300EQ496F6 205 aaPredicted RBP15.87■□□□□ 0.13
MAP1LC3B-206ENST00000564844 CCDC144NLQ6NUI1 221 aa15.87■□□□□ 0.13
MAP1LC3B-206ENST00000564844 CEACAM4O75871 244 aa15.87■□□□□ 0.13
MAP1LC3B-206ENST00000564844 RPL7P18124 248 aaKnown RBP15.87■□□□□ 0.13
MAP1LC3B-206ENST00000564844 C20orf78Q9BR46 151 aa15.87■□□□□ 0.13
MAP1LC3B-206ENST00000564844 DOPEY2Q9Y3R5 2298 aa15.86■□□□□ 0.13
MAP1LC3B-206ENST00000564844 EMP1P54849 157 aa15.86■□□□□ 0.13
MAP1LC3B-206ENST00000564844 HRNRQ86YZ3 2850 aaPredicted RBP15.86■□□□□ 0.13
MAP1LC3B-206ENST00000564844 VSTM5A8MXK1 200 aa15.86■□□□□ 0.13
MAP1LC3B-206ENST00000564844 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
MAP1LC3B-206ENST00000564844 IGKV3D-20A0A0C4DH25 116 aa15.85■□□□□ 0.13
MAP1LC3B-206ENST00000564844 E9PLD3 99 aa15.85■□□□□ 0.13
MAP1LC3B-206ENST00000564844 DEFB1P60022 68 aa15.85■□□□□ 0.13
MAP1LC3B-206ENST00000564844 GAGE13Q4V321 117 aa15.85■□□□□ 0.13
MAP1LC3B-206ENST00000564844 NXT2Q9NPJ8 142 aaKnown RBP15.85■□□□□ 0.13
MAP1LC3B-206ENST00000564844 TTC9CQ8N5M4 171 aa15.84■□□□□ 0.13
MAP1LC3B-206ENST00000564844 SORL1Q92673 2214 aa15.84■□□□□ 0.13
MAP1LC3B-206ENST00000564844 ZNF418Q8TF45 676 aaPredicted RBP15.84■□□□□ 0.13
MAP1LC3B-206ENST00000564844 PTH2Q96A98 100 aa15.84■□□□□ 0.13
MAP1LC3B-206ENST00000564844 KAAG1Q9UBP8 84 aa15.84■□□□□ 0.13
MAP1LC3B-206ENST00000564844 LOC107984156A0A0G2JMH3 177 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 SHISA9B4DS77 424 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 PDE6HQ13956 83 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 C3orf36Q3SXR2 165 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 SPANXN1Q5VSR9 72 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 ARL17AQ8IVW1 177 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 CSPG4Q6UVK1 2322 aa15.83■□□□□ 0.13
MAP1LC3B-206ENST00000564844 CTSGP08311 255 aa15.83■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ECSCRQ19T08 205 aa15.83■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ZMAT4Q9H898 229 aa15.83■□□□□ 0.12
MAP1LC3B-206ENST00000564844 Q6ZS92 163 aa15.83■□□□□ 0.12
MAP1LC3B-206ENST00000564844 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.82■□□□□ 0.12
MAP1LC3B-206ENST00000564844 RAB9AP51151 201 aa15.82■□□□□ 0.12
MAP1LC3B-206ENST00000564844 HIF1ANQ9NWT6 349 aa15.82■□□□□ 0.12
MAP1LC3B-206ENST00000564844 TM2D2Q9BX73 214 aa15.82■□□□□ 0.12
MAP1LC3B-206ENST00000564844 H3BVH4 76 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 C5orf64Q2M2E5 130 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 HIGD1BQ9P298 99 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 DPM3Q9P2X0 92 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 IGLV11-55A0A075B6I3 123 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 LINC01548A6NM66 108 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 M0R381 172 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 IGF1P05019 195 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ZNF48Q96MX3 618 aaPredicted RBP15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 VKORC1Q9BQB6 163 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 RAB1BQ9H0U4 201 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 CENPEQ02224 2701 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 CEACAM3P40198 252 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 LAGE3Q14657 143 aa15.81■□□□□ 0.12
MAP1LC3B-206ENST00000564844 Q8N8P6 123 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 AGPAT4-IT1Q9H0P7 198 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 PGPEP1Q9NXJ5 209 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 IGKV3-7A0A075B6H7 116 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 J3QR89 54 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 APOMO95445 188 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 CLEC3BP05452 202 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 GLMPQ8WWB7 406 aa15.8■□□□□ 0.12
MAP1LC3B-206ENST00000564844 F8W1H4 67 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 HLA-DRB4P13762 266 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 CKS1BP61024 79 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 SHISA2Q6UWI4 295 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms