RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 CNN1P51911 297 aaKnown RBP9.58□□□□□ -0.88
SPG7-209ENST00000564047 CENPWQ5EE01 88 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 EBLN2Q6P2I7 272 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 C9orf47Q6ZRZ4 202 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 GTSCR1Q86UQ5 136 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 OR10J6PQ8NGY7 276 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 C19orf73Q9NVV2 129 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 KLF12Q9Y4X4 402 aa9.58□□□□□ -0.88
SPG7-209ENST00000564047 A0A0J9YX75 114 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 TRBV6-1A0A0K0K1D8 114 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 NPIPB6E9PJ23 425 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 F6UB75 175 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 G3V4G9 280 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 K7EN84 100 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 DUSP14O95147 198 aaKnown RBP9.57□□□□□ -0.88
SPG7-209ENST00000564047 GCGP01275 180 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 S100A2P29034 98 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 DEFB1P60022 68 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 TMEM183BQ1AE95 376 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 COX19Q49B96 90 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 SMIM12Q96EX1 92 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 FMC1Q96HJ9 113 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 IGF2BP2-AS1Q96M15 143 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 LINC00477Q96M19 166 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SPG7-209ENST00000564047 TENM3Q9P273 2699 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 IGLV2-11P01706 119 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 PRB4P10163 310 aaPredicted RBP9.56□□□□□ -0.88
SPG7-209ENST00000564047 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 UBE2G1P62253 170 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 RPL19P84098 196 aaKnown RBP9.56□□□□□ -0.88
SPG7-209ENST00000564047 HIST1H1AQ02539 215 aaPredicted RBP9.56□□□□□ -0.88
SPG7-209ENST00000564047 DNLZQ5SXM8 178 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 TMEM78Q5T7P6 136 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 GDF5OSQ5U4N7 250 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 APRG1Q8IVJ8 170 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 VGLL1Q99990 258 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 PPP1R14DQ9NXH3 145 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 PSG8Q9UQ74 426 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
SPG7-209ENST00000564047 TRAV8-1A0A0A6YYK1 113 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 TRAV34A0A0B4J273 112 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 ZNF705DP0CH99 300 aaPredicted RBP9.55□□□□□ -0.88
SPG7-209ENST00000564047 ZNF705BP0CI00 300 aaPredicted RBP9.55□□□□□ -0.88
SPG7-209ENST00000564047 ZNF138P52744 262 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 KRTAP10-11P60412 298 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 ERCC8Q13216 396 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 ZNF124Q15973 351 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 TMEM183AQ8IXX5 376 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 CLUHP3Q96NS8 147 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 AURKAIP1Q9NWT8 199 aaPredicted RBP9.55□□□□□ -0.88
SPG7-209ENST00000564047 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 V9GYV3 84 aa9.55□□□□□ -0.88
SPG7-209ENST00000564047 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 A8MTW9 85 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 H3BMM0 161 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 PRNTQ86SH4 94 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 Q86TA4 180 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 Q8N1Y9 231 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 ODF3Q96PU9 254 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 ZNF492Q9P255 531 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
SPG7-209ENST00000564047 TRBV7-9A0A0J9YWB2 115 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 LTAP01374 205 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 CT45A10P0DMU9 189 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 SAPCD1Q5SSQ6 148 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 BAGE2Q86Y30 109 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 OR4B1Q8NGF8 309 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 PRR25Q96S07 402 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 WFDC10AQ9H1F0 79 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
SPG7-209ENST00000564047 KPRPQ5T749 579 aaPredicted RBP9.52□□□□□ -0.89
SPG7-209ENST00000564047 TRPT1Q86TN4 253 aaKnown RBP9.52□□□□□ -0.89
SPG7-209ENST00000564047 STHQ8IWL8 128 aa9.52□□□□□ -0.89
SPG7-209ENST00000564047 DEFB125Q8N687 156 aa9.52□□□□□ -0.89
SPG7-209ENST00000564047 Q8TAT8 98 aa9.52□□□□□ -0.89
SPG7-209ENST00000564047 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.89
SPG7-209ENST00000564047 XKRY2A2RUG3 117 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 MT-ND6P03923 174 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 CRISP2P16562 243 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
SPG7-209ENST00000564047 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
SPG7-209ENST00000564047 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
SPG7-209ENST00000564047 RBMY1BA6NDE4 496 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms