RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PKD1P98161 4303 aa12.27□□□□□ -0.45
NME3-205ENST00000563854 SPINK4O60575 86 aa12.26□□□□□ -0.45
NME3-205ENST00000563854 ZNF415Q09FC8 603 aa12.26□□□□□ -0.45
NME3-205ENST00000563854 ESRGQ1W209 222 aa12.26□□□□□ -0.45
NME3-205ENST00000563854 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
NME3-205ENST00000563854 LYPD1Q8N2G4 141 aa12.26□□□□□ -0.45
NME3-205ENST00000563854 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 H3BNG1 76 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 MED14OSP0DP75 135 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 RAB2AP61019 212 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 ACOT6Q3I5F7 207 aaPredicted RBP12.25□□□□□ -0.45
NME3-205ENST00000563854 CMTM2Q8TAZ6 248 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 VSIG2Q96IQ7 327 aa12.25□□□□□ -0.45
NME3-205ENST00000563854 DYNC1H1Q14204 4646 aaKnown RBP12.25□□□□□ -0.45
NME3-205ENST00000563854 RBAKDNA6NC62 111 aa12.24□□□□□ -0.45
NME3-205ENST00000563854 DIRC3C9JPN6 131 aa12.24□□□□□ -0.45
NME3-205ENST00000563854 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
NME3-205ENST00000563854 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
NME3-205ENST00000563854 BATF3Q9NR55 127 aa12.24□□□□□ -0.45
NME3-205ENST00000563854 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
NME3-205ENST00000563854 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
NME3-205ENST00000563854 A0A096LPF7 62 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 PGPA6NDG6 321 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 ZNF266Q14584 549 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 FAM74A1Q5RGS3 127 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 C18orf15Q96N68 181 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 DNAH11Q96DT5 4516 aa12.23□□□□□ -0.45
NME3-205ENST00000563854 TRBV7-9A0A0J9YWB2 115 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 PAX4O43316 350 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 OR10G4Q8NGN3 311 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 OR10G9Q8NGN4 311 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 OR10G7Q8NGN6 311 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 KRTAP1-5Q9BYS1 174 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 OTORQ9NRC9 128 aa12.22□□□□□ -0.45
NME3-205ENST00000563854 TMEM183BQ1AE95 376 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 HSD17B11Q8NBQ5 300 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 C8orf49Q96NF6 230 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 MDFICQ9P1T7 246 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 ICOSQ9Y6W8 199 aa12.21□□□□□ -0.45
NME3-205ENST00000563854 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
NME3-205ENST00000563854 F6UZH7 168 aa12.2□□□□□ -0.46
NME3-205ENST00000563854 GNG5P63218 68 aa12.2□□□□□ -0.46
NME3-205ENST00000563854 MED28Q9H204 178 aa12.2□□□□□ -0.46
NME3-205ENST00000563854 TRGV11A0A075B6L2 103 aa12.19□□□□□ -0.46
NME3-205ENST00000563854 TRGV4A0A0C4DH28 118 aa12.19□□□□□ -0.46
NME3-205ENST00000563854 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
NME3-205ENST00000563854 Q6AWC8 147 aa12.19□□□□□ -0.46
NME3-205ENST00000563854 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
NME3-205ENST00000563854 LENEPQ9Y5L5 61 aa12.19□□□□□ -0.46
NME3-205ENST00000563854 TRAV8-1A0A0A6YYK1 113 aa12.18□□□□□ -0.46
NME3-205ENST00000563854 PTTG1O95997 202 aa12.18□□□□□ -0.46
NME3-205ENST00000563854 SFTA3P0C7M3 94 aa12.18□□□□□ -0.46
NME3-205ENST00000563854 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
NME3-205ENST00000563854 HHLA3Q9XRX5 114 aa12.18□□□□□ -0.46
NME3-205ENST00000563854 CRYBA4P53673 196 aa12.17□□□□□ -0.46
NME3-205ENST00000563854 FHL2Q14192 279 aa12.17□□□□□ -0.46
NME3-205ENST00000563854 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
NME3-205ENST00000563854 SGK494Q96LW2 274 aa12.17□□□□□ -0.46
NME3-205ENST00000563854 NXPH4O95158 308 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 SLAQ13239 276 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 AQP10Q96PS8 301 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 MUC4Q99102 2169 aa12.16□□□□□ -0.46
NME3-205ENST00000563854 RYR1P21817 5038 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 A0A1W2PPQ1 181 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 SIVA1O15304 175 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 ATP6V0CP27449 155 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 IQCF2Q8IXL9 164 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 SPXQ9BT56 116 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 SH3BGRL3Q9H299 93 aa12.15□□□□□ -0.46
NME3-205ENST00000563854 GNRH2O43555 120 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
NME3-205ENST00000563854 SPATA12Q7Z6I5 190 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 OR2G3Q8NGZ4 309 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
NME3-205ENST00000563854 RAB24Q969Q5 203 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
NME3-205ENST00000563854 STAG3L2P0CL84 134 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 STAG3L3P0CL85 134 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 GCHFRP30047 84 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 LINC00315P59091 139 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 Q5BKY6 102 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 PSMG3Q9BT73 122 aaPredicted RBP12.13□□□□□ -0.47
NME3-205ENST00000563854 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
NME3-205ENST00000563854 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 IGHV3-16A0A0C4DH30 117 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 TYMSP04818 313 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 GIPP09681 153 aaPredicted RBP12.12□□□□□ -0.47
NME3-205ENST00000563854 GYPEP15421 78 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 SRIP30626 198 aa12.12□□□□□ -0.47
NME3-205ENST00000563854 LYPD5Q6UWN5 251 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms