RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CLEC5AQ9NY25 188 aa3.84□□□□□ -1.79
HERPUD1-207ENST00000563781 NBEAL2Q6ZNJ1 2754 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 TRAV1-1A0A0B4J248 108 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 IGHV4-28A0A0C4DH34 117 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 K7EIL1 84 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 ISLRO14498 428 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 CXorf1O96002 111 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 PRB2P02812 416 aaPredicted RBP3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 PSMB3P49720 205 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 DEFB131AP59861 70 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 PAFAH1B2P68402 229 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 CCL20P78556 96 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 PDE6HQ13956 83 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 GUK1Q16774 197 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 TEX261Q6UWH6 196 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 RNF182Q8N6D2 247 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 BLNKQ8WV28 456 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 KRTAP17-1Q9BYP8 105 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 GEMIN7Q9H840 131 aaKnown RBP3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 MSRB1Q9NZV6 116 aa3.83□□□□□ -1.8
HERPUD1-207ENST00000563781 TGP01266 2768 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 A0A1B0GV50 99 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 RBMY1BA6NDE4 496 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 RBMY1EA6NEQ0 496 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 KNCNA6PVL3 124 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 A8MTW9 85 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 ZNF705FA8MVS1 300 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 ZNF705EA8MWA4 302 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 OR11H12B2RN74 326 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 GGTLC3B5MD39 225 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 PRAC2D3DTV9 90 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 F6UB75 175 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 M0R3E3 92 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 RBMY1DP0C7P1 496 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 PRB4P10163 310 aaPredicted RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 ID1P41134 155 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 PSG3Q16557 428 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 PSMG4Q5JS54 123 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 GDF5OSQ5U4N7 250 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 SAMD13Q5VXD3 122 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 GTSCR1Q86UQ5 136 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 APRG1Q8IVJ8 170 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 EXOC3-AS1Q8N2X6 119 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 DEFB125Q8N687 156 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 SFT2D1Q8WV19 159 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 MRPL53Q96EL3 112 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 LINC00052Q96N35 136 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 SLC50A1Q9BRV3 221 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 NDUFAF3Q9BU61 184 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 Q9H3A6 140 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 TMEM167BQ9NRX6 74 aa3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 YTHDF2Q9Y5A9 579 aaKnown RBP3.82□□□□□ -1.8
HERPUD1-207ENST00000563781 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 SORL1Q92673 2214 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 A0A0J9YX75 114 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 FAM74A7A6NL05 159 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 H3BMM0 161 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 NMBP08949 121 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 HLA-DRB4P13762 266 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 CMC4P56277 68 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 UBE2G2P60604 165 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 SNRPD3P62318 126 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 RANP62826 216 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 S100A12P80511 92 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 PSG9Q00887 426 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 LINC00322Q6ZN03 302 aaPredicted RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 COX8CQ7Z4L0 72 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 LYPD1Q8N2G4 141 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 ZNF738Q8NE65 137 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 LYPD6BQ8NI32 183 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 PCNPQ8WW12 178 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 RPUSD4Q96CM3 377 aaKnown RBP3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 OTORQ9NRC9 128 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 ARL2-SNX15V9GYD0 113 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 HLA-DRB4X5D2U9 266 aa3.81□□□□□ -1.8
HERPUD1-207ENST00000563781 COL7A1Q02388 2944 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 TRAV26-1A0A087WT03 109 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 IGKV2-40A0A087WW87 121 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 A0A1W2PRE2 83 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 PGPA6NDG6 321 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 IFNA7P01567 189 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 IGKV2D-40P01614 121 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 HBE1P02100 147 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 GIG44P09565 113 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 ZNF705DP0CH99 300 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 ZNF705BP0CI00 300 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 G0S2P27469 103 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 ATP5G3P48201 142 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 GNG5P63218 68 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 DEFA6Q01524 100 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 ACTL10Q5JWF8 245 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 AMTNQ6UX39 209 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 FOXI2Q6ZQN5 318 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 OR8A1Q8NGG7 326 aa3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 SAV1Q9H4B6 383 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-207ENST00000563781 GNG13Q9P2W3 67 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms