RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 A0A0D9SG52 128 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
E4F1-203ENST00000563643 ARL14EPLP0DKL9 152 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 LEPP41159 167 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 CSN1S1P47710 185 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 TTC32Q5I0X7 151 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 C9orf47Q6ZRZ4 202 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 ARPC5LQ9BPX5 153 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 C20orf144Q9BQM9 153 aa12.58□□□□□ -0.4
E4F1-203ENST00000563643 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.4
E4F1-203ENST00000563643 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
E4F1-203ENST00000563643 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
E4F1-203ENST00000563643 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
E4F1-203ENST00000563643 ERCC8Q13216 396 aa12.57□□□□□ -0.4
E4F1-203ENST00000563643 AGPAT4-IT1Q9H0P7 198 aa12.57□□□□□ -0.4
E4F1-203ENST00000563643 OTORQ9NRC9 128 aa12.57□□□□□ -0.4
E4F1-203ENST00000563643 RBAKDNA6NC62 111 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 NUDT3O95989 172 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 DAD1P61803 113 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 AKR1C8PQ5T2L2 129 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 CDPF1Q6NVV7 123 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 RXFP4Q8TDU9 374 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 VGLL1Q99990 258 aa12.56□□□□□ -0.4
E4F1-203ENST00000563643 YTHDF2Q9Y5A9 579 aaKnown RBP12.56□□□□□ -0.4
E4F1-203ENST00000563643 ZNF705GA8MUZ8 300 aaPredicted RBP12.55□□□□□ -0.4
E4F1-203ENST00000563643 H7BYZ3 331 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 CXorf1O96002 111 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 SLC25A5P05141 298 aaKnown RBP12.55□□□□□ -0.4
E4F1-203ENST00000563643 GCHFRP30047 84 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 TAS2R60P59551 318 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 KRTAP10-1P60331 282 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 TMEM78Q5T7P6 136 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 SUN5Q8TC36 379 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 LINC01587Q99440 93 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 Q9H8V8 135 aa12.55□□□□□ -0.4
E4F1-203ENST00000563643 KLLNB2CW77 178 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 BCL2L11O43521 198 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 NMBP08949 121 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 CRISP2P16562 243 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 ARL6IP6Q8N6S5 226 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 CMTM2Q8TAZ6 248 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 TMEM167BQ9NRX6 74 aa12.54□□□□□ -0.4
E4F1-203ENST00000563643 LRP1Q07954 4544 aaKnown RBP12.54□□□□□ -0.4
E4F1-203ENST00000563643 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 CTXND1A0A1B0GTU2 59 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 PGPA6NDG6 321 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 HYLS1Q96M11 299 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 ZNF492Q9P255 531 aa12.53□□□□□ -0.4
E4F1-203ENST00000563643 C7orf71A4D174 169 aa12.52□□□□□ -0.41
E4F1-203ENST00000563643 J3KRW8 73 aa12.52□□□□□ -0.41
E4F1-203ENST00000563643 PRM2P04554 102 aa12.52□□□□□ -0.41
E4F1-203ENST00000563643 ZNF138P52744 262 aa12.52□□□□□ -0.41
E4F1-203ENST00000563643 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
E4F1-203ENST00000563643 ZNF471Q9BX82 626 aaPredicted RBP12.52□□□□□ -0.41
E4F1-203ENST00000563643 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
E4F1-203ENST00000563643 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
E4F1-203ENST00000563643 AZU1P20160 251 aa12.51□□□□□ -0.41
E4F1-203ENST00000563643 EIF5AP63241 154 aaKnown RBP12.51□□□□□ -0.41
E4F1-203ENST00000563643 HAMPP81172 84 aa12.51□□□□□ -0.41
E4F1-203ENST00000563643 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
E4F1-203ENST00000563643 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 PFDN1O60925 122 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 HTN1P15515 57 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 ZNF493Q6ZR52 646 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 Q8TAT8 98 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 TMEM263Q8WUH6 116 aaKnown RBP12.5□□□□□ -0.41
E4F1-203ENST00000563643 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 C16orf74Q96GX8 76 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 PYGO2Q9BRQ0 406 aa12.5□□□□□ -0.41
E4F1-203ENST00000563643 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 C1QBP02746 253 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 GPX1P07203 203 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 CD300CQ08708 224 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 GOLT1AQ6ZVE7 132 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 IQCF2Q8IXL9 164 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 RNASE8Q8TDE3 154 aaKnown RBP12.49□□□□□ -0.41
E4F1-203ENST00000563643 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 LENEPQ9Y5L5 61 aa12.49□□□□□ -0.41
E4F1-203ENST00000563643 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 A0A1W2PRE2 83 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 EREGO14944 169 aa12.48□□□□□ -0.41
E4F1-203ENST00000563643 ZNF324O75467 553 aaPredicted RBP12.48□□□□□ -0.41
E4F1-203ENST00000563643 RNASE4P34096 147 aaKnown RBP12.48□□□□□ -0.41
E4F1-203ENST00000563643 PRR9Q5T870 116 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms