RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 K7EQG2 157 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 OVOL1O14753 267 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 GZMBP10144 247 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 ID1P41134 155 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 ZNF80P51504 273 aaPredicted RBP13.55□□□□□ -0.24
COMMD4-208ENST00000563220 ZNF138P52744 262 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 TMEM78Q5T7P6 136 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 LURAP1LQ8IV03 231 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 TSKUQ8WUA8 353 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 C2CD3Q4AC94 2353 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 CT45A10P0DMU9 189 aa13.55□□□□□ -0.24
COMMD4-208ENST00000563220 FRMD6-AS1P0C7T7 363 aa13.54□□□□□ -0.24
COMMD4-208ENST00000563220 SAMD13Q5VXD3 122 aa13.54□□□□□ -0.24
COMMD4-208ENST00000563220 NDFIP1Q9BT67 221 aa13.54□□□□□ -0.24
COMMD4-208ENST00000563220 PPP1R14DQ9NXH3 145 aa13.54□□□□□ -0.24
COMMD4-208ENST00000563220 SPINK4O60575 86 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 SH2D1AO60880 128 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
COMMD4-208ENST00000563220 NSUN5P1Q3KNT7 163 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 CT83Q5H943 113 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 OR2D3Q8NGH3 330 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 NEU1Q99519 415 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 ZNF688P0C7X2 276 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 COX19Q49B96 90 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 FAM162BQ5T6X4 162 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 OR10J6PQ8NGY7 276 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 GTSF1Q8WW33 167 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
COMMD4-208ENST00000563220 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.25
COMMD4-208ENST00000563220 A8MWL6 223 aa13.52□□□□□ -0.25
COMMD4-208ENST00000563220 TSTD3H0UI37 97 aa13.52□□□□□ -0.25
COMMD4-208ENST00000563220 HIST1H1AQ02539 215 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-208ENST00000563220 DEFB114Q30KQ6 69 aa13.52□□□□□ -0.25
COMMD4-208ENST00000563220 NUP35Q8NFH5 326 aa13.52□□□□□ -0.25
COMMD4-208ENST00000563220 HIGD1CA8MV81 97 aa13.51□□□□□ -0.25
COMMD4-208ENST00000563220 PSMG4Q5JS54 123 aa13.51□□□□□ -0.25
COMMD4-208ENST00000563220 TMEM61Q8N0U2 210 aa13.51□□□□□ -0.25
COMMD4-208ENST00000563220 GNB1LQ9BYB4 327 aa13.51□□□□□ -0.25
COMMD4-208ENST00000563220 ESDP10768 282 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 PAFAH1B2P68402 229 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-208ENST00000563220 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 NAT8BQ9UHF3 227 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 A0A1B0GUS0 222 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 MT-ND6P03923 174 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
COMMD4-208ENST00000563220 DEFA6Q01524 100 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 GDF5OSQ5U4N7 250 aa13.5□□□□□ -0.25
COMMD4-208ENST00000563220 MRPL18Q9H0U6 180 aaKnown RBP13.5□□□□□ -0.25
COMMD4-208ENST00000563220 MRPL54Q6P161 138 aaKnown RBP13.49□□□□□ -0.25
COMMD4-208ENST00000563220 WDR73Q6P4I2 378 aa13.49□□□□□ -0.25
COMMD4-208ENST00000563220 RBPMS2Q6ZRY4 209 aaKnown RBP13.49□□□□□ -0.25
COMMD4-208ENST00000563220 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
COMMD4-208ENST00000563220 GFRA4Q9GZZ7 299 aa13.49□□□□□ -0.25
COMMD4-208ENST00000563220 LENEPQ9Y5L5 61 aa13.49□□□□□ -0.25
COMMD4-208ENST00000563220 FABP5P3A8MUU1 101 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 CD300EQ496F6 205 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-208ENST00000563220 PRR9Q5T870 116 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 ZNF575Q86XF7 245 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 FAM19A4Q96LR4 140 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 CD33P20138 364 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 DDTP30046 118 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 Q0VG73 95 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 IQCJQ1A5X6 159 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 Q6ZQT7 251 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 ZFAND2AQ8N6M9 145 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 PGLYRP4Q96LB8 373 aa13.48□□□□□ -0.25
COMMD4-208ENST00000563220 TMSB15BA0A087X1C1 80 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 FAM231BA6NCW3 169 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 FOXA3P55318 350 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-208ENST00000563220 TMEM256Q8N2U0 113 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 SIGLEC8Q9NYZ4 499 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 WNK1Q9H4A3 2382 aa13.47□□□□□ -0.25
COMMD4-208ENST00000563220 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
COMMD4-208ENST00000563220 CRISP2P16562 243 aa13.46□□□□□ -0.25
COMMD4-208ENST00000563220 TRAV2A0A0B4J234 112 aa13.46□□□□□ -0.26
COMMD4-208ENST00000563220 A0A0J9YX75 114 aa13.46□□□□□ -0.26
COMMD4-208ENST00000563220 J3KRW8 73 aa13.46□□□□□ -0.26
COMMD4-208ENST00000563220 RAB4BP61018 213 aa13.46□□□□□ -0.26
COMMD4-208ENST00000563220 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.26
COMMD4-208ENST00000563220 JMJD1CQ15652 2540 aa13.45□□□□□ -0.26
COMMD4-208ENST00000563220 SNURFLB1AK76 121 aa13.45□□□□□ -0.26
COMMD4-208ENST00000563220 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
COMMD4-208ENST00000563220 C14orf144Q96I85 54 aa13.45□□□□□ -0.26
COMMD4-208ENST00000563220 TP53TG3Q9ULZ0 132 aa13.45□□□□□ -0.26
COMMD4-208ENST00000563220 ORM1P02763 201 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 ZNF664Q8N3J9 261 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 SORL1Q92673 2214 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 NUPR1O60356 82 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 DEFB131AP59861 70 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 RASL11AQ6T310 242 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 PRO1933Q9H354 126 aa13.44□□□□□ -0.26
COMMD4-208ENST00000563220 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
COMMD4-208ENST00000563220 TRBV7-9A0A0J9YWB2 115 aa13.43□□□□□ -0.26
COMMD4-208ENST00000563220 A0A1B0GXF2 115 aa13.43□□□□□ -0.26
COMMD4-208ENST00000563220 LINC00310P59036 64 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 261.1 ms