RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 G3V4G9 280 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 IGHV3-11P01762 117 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 Q6ZRG5 221 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 BPIFA4PQ86YQ2 179 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 ZC2HC1AQ96GY0 325 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 FAM19A4Q96LR4 140 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 UHRF2Q96PU4 802 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 C1QTNF4Q9BXJ3 329 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 ARL6Q9H0F7 186 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 TMPRSS5Q9H3S3 457 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 MAP1LC3AQ9H492 121 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 FUT9Q9Y231 359 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 IL4P05112 153 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 HLA-DRB4P13762 266 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 RHOBP62745 196 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 CD300EQ496F6 205 aaPredicted RBP4.18□□□□□ -1.74
LINC01963-201ENST00000562038 TCF24Q7RTU0 167 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 TRPT1Q86TN4 253 aaKnown RBP4.18□□□□□ -1.74
LINC01963-201ENST00000562038 OR5C1Q8NGR4 320 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 MBD3L1Q8WWY6 194 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 HLA-DRB4X5D2U9 266 aa4.18□□□□□ -1.74
LINC01963-201ENST00000562038 FAM24AA6NFZ4 105 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 K7EIL1 84 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 FGF7P21781 194 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 S100A10P60903 97 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 SNRPD3P62318 126 aaKnown RBP4.17□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF415Q09FC8 603 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 C10orf113Q5VZT2 155 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 OR8I2Q8N0Y5 310 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TMEM256Q8N2U0 113 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF709Q8N972 641 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 SCGB1C1Q8TD33 95 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 CYTL1Q9NRR1 136 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 SMAD5-AS1Q9Y6J3 95 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TNCP24821 2201 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TMEM189A5PLL7 270 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 VCYO14598 125 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TCTAP57738 103 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 DEFB136Q30KP8 78 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 PATE2Q6UY27 113 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 LINC01551Q86U37 167 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 FAM167A-AS1Q96KT0 104 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 SPATA25Q9BR10 227 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 MS4A6AQ9H2W1 248 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TMEM167BQ9NRX6 74 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 COX7A2P2O60397 106 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 CRISP2P16562 243 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TSPOP30536 169 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 TMEM61Q8N0U2 210 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF503Q96F45 646 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 ACY3Q96HD9 319 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 C18orf15Q96N68 181 aa4.17□□□□□ -1.74
LINC01963-201ENST00000562038 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF705EA8MWA4 302 aaPredicted RBP4.16□□□□□ -1.74
LINC01963-201ENST00000562038 IFNA1P01562 189 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 CXCL1P09341 107 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 TFPI2P48307 235 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 GAGE5Q13069 117 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 GAGE6Q13070 117 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 C17orf77Q96MU5 243 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 GTSF1LQ9H1H1 148 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 CTXND1A0A1B0GTU2 59 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 IFITM10A6NMD0 228 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 DNLZQ5SXM8 178 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 C9orf47Q6ZRZ4 202 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 RASL10AQ92737 203 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 RNF183Q96D59 192 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 SLC25A2Q9BXI2 301 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF331Q9NQX6 463 aaPredicted RBP4.16□□□□□ -1.74
LINC01963-201ENST00000562038 OTORQ9NRC9 128 aa4.16□□□□□ -1.74
LINC01963-201ENST00000562038 TRBV19A0A075B6N1 114 aa4.15□□□□□ -1.74
LINC01963-201ENST00000562038 USP17L23D6RBM5 183 aa4.15□□□□□ -1.74
LINC01963-201ENST00000562038 TPT1P13693 172 aaKnown RBP4.15□□□□□ -1.74
LINC01963-201ENST00000562038 ZNF90Q03938 601 aa4.15□□□□□ -1.74
LINC01963-201ENST00000562038 SPINK9Q5DT21 86 aa4.15□□□□□ -1.74
LINC01963-201ENST00000562038 RPRMQ9NS64 109 aa4.15□□□□□ -1.74
LINC01963-201ENST00000562038 UBE2L5PA0A1B0GUS4 154 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 CXorf1O96002 111 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 LEPP41159 167 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 RAB5BP61020 215 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 HIST1H1AQ02539 215 aaPredicted RBP4.15□□□□□ -1.75
LINC01963-201ENST00000562038 TMEM37Q8WXS4 190 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 ACTR3CQ9C0K3 210 aaPredicted RBP4.15□□□□□ -1.75
LINC01963-201ENST00000562038 RNASE7Q9H1E1 156 aaKnown RBP4.15□□□□□ -1.75
LINC01963-201ENST00000562038 SMDT1Q9H4I9 107 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 TENM1Q9UKZ4 2725 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 FXYD6-FXYD2A0A087WZ82 144 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 TRAV8-2A0A0B4J237 113 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 A0A0J9YX75 114 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 K7ERU9 68 aa4.15□□□□□ -1.75
LINC01963-201ENST00000562038 HBE1P02100 147 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 508 ms