RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MYH9P35579 1960 aaKnown RBP-0.28□□□□□ -2.45
USP8-218ENST00000561330 RREB1Q92766 1687 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 TMEM30CPA0ZSE6 113 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 HIGD1CA8MV81 97 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 IL7P13232 177 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 ETV6P41212 452 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 NDUFA6P56556 154 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 IQCJQ1A5X6 159 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 IDO2Q6ZQW0 420 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 OR4B1Q8NGF8 309 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 CCL4L1Q8NHW4 92 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 CIB3Q96Q77 187 aaPredicted RBP-0.29□□□□□ -2.46
USP8-218ENST00000561330 DSCR8Q96T75 97 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 PRR15LQ9BU68 103 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 COMMD3Q9UBI1 195 aa-0.29□□□□□ -2.46
USP8-218ENST00000561330 USP54Q70EL1 1684 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 PKDREJQ9NTG1 2253 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 KPNA4O00629 521 aaPredicted RBP-0.3□□□□□ -2.46
USP8-218ENST00000561330 FABP2P12104 132 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 ARF6P62330 175 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 RTL8BQ17RB0 113 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 OR5H6Q8NGV6 325 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 CLEC2BQ92478 149 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 MCEEQ96PE7 176 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 SS18L2Q9UHA2 77 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 DLEC1Q9Y238 1755 aa-0.3□□□□□ -2.46
USP8-218ENST00000561330 TNS1Q9HBL0 1735 aaKnown RBP-0.3□□□□□ -2.46
USP8-218ENST00000561330 CHD9Q3L8U1 2897 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 AKAP6Q13023 2319 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 MUC12Q9UKN1 5478 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 F2Z2F3 143 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 H3BQV1 296 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 TPST1O60507 370 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 IGKCP01834 107 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 MPC1LP0DKB6 136 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 TPT1P13693 172 aaKnown RBP-0.31□□□□□ -2.46
USP8-218ENST00000561330 KLKP1Q107X0 134 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 IZUMO2Q6UXV1 221 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 DEFB132Q7Z7B7 95 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 MNS1Q8NEH6 495 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 OR8J3Q8NGG0 315 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 ISOC1Q96CN7 298 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 BORCS8Q96FH0 119 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 FKBP11Q9NYL4 201 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 MED11Q9P086 117 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 FGD6Q6ZV73 1430 aa-0.31□□□□□ -2.46
USP8-218ENST00000561330 ADGBQ8N7X0 1667 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 C9JAW5 83 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 CDC42EP2O14613 210 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 EDF1O60869 148 aaKnown RBP-0.32□□□□□ -2.46
USP8-218ENST00000561330 CFDP00746 253 aaPredicted RBP-0.32□□□□□ -2.46
USP8-218ENST00000561330 IGF2P01344 180 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 BCL2P10415 239 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 DNAJB13P59910 316 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 UNQ5815/PRO19632Q6UWF5 114 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 LYPD5Q6UWN5 251 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 OR13C6PQ8NH95 151 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 GINS3Q9BRX5 216 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 TAF9BQ9HBM6 251 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 OTORQ9NRC9 128 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 HSPG2P98160 4391 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 PLCE1Q9P212 2302 aa-0.32□□□□□ -2.46
USP8-218ENST00000561330 SPTBN2O15020 2390 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 PTPN13Q12923 2485 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 A0A096LNT2 108 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 A0A0G2JMM0 328 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 TMEM189A5PLL7 270 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 CSN2P05814 226 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 CCKP06307 115 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 S100A6P06703 90 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 GTF2A1P52655 376 aaPredicted RBP-0.33□□□□□ -2.46
USP8-218ENST00000561330 DYDC1Q8WWB3 177 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 DIRC1Q969H9 104 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 DMAC1Q96GE9 116 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 PRELID3AQ96N28 172 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 SMIM7Q9BQ49 75 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 STAB1Q9NY15 2570 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 UNC13BO14795 1591 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 CACNA1AO00555 2505 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 DLC1Q96QB1 1528 aa-0.33□□□□□ -2.46
USP8-218ENST00000561330 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 CDK12Q9NYV4 1490 aaPredicted RBP-0.34□□□□□ -2.46
USP8-218ENST00000561330 LOC107986453A0A1B0GWG9 222 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 MCRIP1C9JLW8 97 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 SOGA1O94964 1423 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 IFNA1P01562 189 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 SAA1P0DJI8 122 aaPredicted RBP-0.34□□□□□ -2.46
USP8-218ENST00000561330 MAXP61244 160 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 RHOHQ15669 191 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 LTC4SQ16873 150 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 FER1L6Q2WGJ9 1857 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 TEX29Q8N6K0 151 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 ATG5Q9H1Y0 275 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 COA4Q9NYJ1 87 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 IL20Q9NYY1 176 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 MPC1Q9Y5U8 109 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 LAMC3Q9Y6N6 1575 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 LRP2P98164 4655 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 ZANQ9Y493 2812 aa-0.34□□□□□ -2.46
USP8-218ENST00000561330 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.35□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms