RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
TPM1-211ENST00000558314 INMT-MINDY4F8WBC2 141 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 SSNA1O43805 119 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 LINC00315P59091 139 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 ZNF415Q09FC8 603 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 FFAR4Q5NUL3 377 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 ST6GAL2Q96JF0 529 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 NAGKQ9UJ70 344 aa10.7□□□□□ -0.7
TPM1-211ENST00000558314 A0A1W2PPQ1 181 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 SIVA1O15304 175 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 NXPH4O95158 308 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 CYCSP99999 105 aaKnown RBP10.69□□□□□ -0.7
TPM1-211ENST00000558314 IBA57Q5T440 356 aaKnown RBP10.69□□□□□ -0.7
TPM1-211ENST00000558314 SCGB1C1Q8TD33 95 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 ATP5SQ99766 215 aa10.69□□□□□ -0.7
TPM1-211ENST00000558314 TRGV4A0A0C4DH28 118 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 PRAF2O60831 178 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 CDK2AP2O75956 126 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 IFNA5P01569 189 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 NMBP08949 121 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 PPP1R1CQ8WVI7 109 aa10.68□□□□□ -0.7
TPM1-211ENST00000558314 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM1-211ENST00000558314 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 HHLA3Q9XRX5 114 aa10.67□□□□□ -0.7
TPM1-211ENST00000558314 H2BFSP57053 126 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 IFITM3Q01628 133 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 KHDC3LQ587J8 217 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 PCNPQ8WW12 178 aaKnown RBP10.66□□□□□ -0.7
TPM1-211ENST00000558314 HSPB11Q9Y547 144 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
TPM1-211ENST00000558314 CRYBA4P53673 196 aa10.65□□□□□ -0.7
TPM1-211ENST00000558314 TAS2R45P59539 299 aa10.65□□□□□ -0.7
TPM1-211ENST00000558314 FHL2Q14192 279 aa10.65□□□□□ -0.7
TPM1-211ENST00000558314 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
TPM1-211ENST00000558314 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
TPM1-211ENST00000558314 SCRT2Q9NQ03 307 aa10.65□□□□□ -0.7
TPM1-211ENST00000558314 PGPA6NDG6 321 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 DIRC3C9JPN6 131 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 MPC2O95563 127 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 PET100P0DJ07 73 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 RPL12P30050 165 aaKnown RBP10.64□□□□□ -0.71
TPM1-211ENST00000558314 SRIP30626 198 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 SLAQ13239 276 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 ZNF266Q14584 549 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
TPM1-211ENST00000558314 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 A0A1W2PPV4 95 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 F6UZH7 168 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 EREGO14944 169 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
TPM1-211ENST00000558314 GYPEP15421 78 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
TPM1-211ENST00000558314 GOLT1AQ6ZVE7 132 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 NEGR1Q7Z3B1 354 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 MBD2Q9UBB5 411 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 HSPG2P98160 4391 aa10.63□□□□□ -0.71
TPM1-211ENST00000558314 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
TPM1-211ENST00000558314 FAM74A1Q5RGS3 127 aa10.62□□□□□ -0.71
TPM1-211ENST00000558314 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
TPM1-211ENST00000558314 TRBV7-9A0A0J9YWB2 115 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 GNRH2O43555 120 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 RAB2AP61019 212 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 GNG5P63218 68 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 ACOT6Q3I5F7 207 aaPredicted RBP10.61□□□□□ -0.71
TPM1-211ENST00000558314 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 SPXQ9BT56 116 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 WFDC1Q9HC57 220 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
TPM1-211ENST00000558314 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 TRAV8-1A0A0A6YYK1 113 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 K7EQD1 137 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 Q6AWC8 147 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 Q8N1X5 172 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 MARVELD1Q9BSK0 173 aa10.6□□□□□ -0.71
TPM1-211ENST00000558314 PTTG1O95997 202 aa10.59□□□□□ -0.71
TPM1-211ENST00000558314 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
TPM1-211ENST00000558314 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
TPM1-211ENST00000558314 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
TPM1-211ENST00000558314 OR10G4Q8NGN3 311 aa10.59□□□□□ -0.71
TPM1-211ENST00000558314 TREM1Q9NP99 234 aa10.59□□□□□ -0.71
TPM1-211ENST00000558314 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 TRAV21A0A0B4J279 112 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 LOC100131303A0A0U1RQF7 123 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 C9JCJ5 164 aa10.58□□□□□ -0.72
TPM1-211ENST00000558314 EVI2AP22794 236 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms