RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 OR10X1Q8NGY0 326 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 GNPDA2Q8TDQ7 276 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 ZNF714Q96N38 554 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 YPEL2Q96QA6 119 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 C9orf16Q9BUW7 83 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 IMUPQ9GZP8 106 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 CST11Q9H112 138 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 TCEAL2Q9H3H9 227 aaPredicted RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 LRTM1Q9HBL6 345 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 ENY2Q9NPA8 101 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 MRPL36Q9P0J6 103 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 HSPB8Q9UJY1 196 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 PRNDQ9UKY0 176 aa-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 FAM32AQ9Y421 112 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 URB1O60287 2271 aaKnown RBP-0.26□□□□□ -2.45
FOXN3-216ENST00000557496 PARP14Q460N5 1801 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 MUC22E2RYF6 1773 aaPredicted RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 PIK3C2AO00443 1686 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 ADGBQ8N7X0 1667 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 SOGA1O94964 1423 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 RTL9Q8NET4 1388 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 A0A087WTM6 91 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 GVQW2A0A096LPI5 108 aaPredicted RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 A0A096LPI6 279 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 TRAV5A0A0B4J249 113 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 C3orf85A0A1B0GTC6 90 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 HIST1H2BKO60814 126 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 GGCTO75223 188 aaKnown RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 IFNA7P01567 189 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 HIST1H2BJP06899 126 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 IL7P13232 177 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 GLRXP35754 106 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 CAPZBP47756 277 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 VBP1P61758 197 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 SNRPD3P62318 126 aaKnown RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 HBBP68871 147 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 CCL7P80098 99 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 MYL5Q02045 173 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 IQCJQ1A5X6 159 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 FKBP1CQ5VVH2 108 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 C1orf140Q5VVS0 124 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 HACD4Q5VWC8 232 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 PTRHD1Q6GMV3 140 aaKnown RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 LYPD5Q6UWN5 251 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 LINC00299Q6ZSB3 139 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 CLEC2BQ92478 149 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 DIRC1Q969H9 104 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 BORCS8Q96FH0 119 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 CFAP53Q96M91 514 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 OR4C12Q96R67 309 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 ARMC1Q9NVT9 282 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 IL20Q9NYY1 176 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 MRPL35Q9NZE8 188 aaKnown RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 SLC22A13Q9Y226 551 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 MYH6P13533 1939 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 EP300Q09472 2414 aaPredicted RBP-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 WDR97A6NE52 1622 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 DNAH6Q9C0G6 4158 aa-0.27□□□□□ -2.45
FOXN3-216ENST00000557496 TECPR2O15040 1411 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 FAM135BQ49AJ0 1406 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 PRORSD1PA6NEY8 169 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 C10orf142B7Z368 130 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 SERPINA1P01009 418 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 IGF2P01344 180 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 MT-ND6P03923 174 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 GYPBP06028 91 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 NMBP08949 121 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 SLC25A4P12235 298 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 FABP4P15090 132 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 OGNP20774 298 aaKnown RBP-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 ETV6P41212 452 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 RPL35P42766 123 aaKnown RBP-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 CRYBA4P53673 196 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 ELOF1P60002 83 aaKnown RBP-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 EMX2Q04743 252 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 KLKP1Q107X0 134 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 LIN52Q52LA3 116 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 HRCT1Q6UXD1 115 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 IZUMO2Q6UXV1 221 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 SMIM20Q8N5G0 67 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 TEX29Q8N6K0 151 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 TMEM229BQ8NBD8 167 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 OR5A2Q8NGI9 324 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 FAM213BQ8TBF2 198 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 EFCAB11Q9BUY7 163 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 OR2J1Q9GZK6 312 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 MAP1LC3BQ9GZQ8 125 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 TMEM14BQ9NUH8 114 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 TPRKBQ9Y3C4 175 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 PKD1P98161 4303 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 PPRC1Q5VV67 1664 aaKnown RBP-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 HERC2O95714 4834 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 USH2AO75445 5202 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 UNC13BO14795 1591 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 UBR4Q5T4S7 5183 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 CREBBPQ92793 2442 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 DLC1Q96QB1 1528 aa-0.28□□□□□ -2.45
FOXN3-216ENST00000557496 TCOF1Q13428 1488 aaKnown RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 CDK12Q9NYV4 1490 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 UHRF1BP1Q6BDS2 1440 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms