RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TVP23CQ96ET8 276 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 LINC00467Q9BRT7 94 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 TMPRSS5Q9H3S3 457 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 CYTL1Q9NRR1 136 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 HERC2O95714 4834 aa5.67□□□□□ -1.5
VTI1B-206ENST00000556461 IGHV1OR15-1A0A075B7D0 117 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 TRBV7-9A0A0J9YWB2 115 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 A0A0J9YY99 117 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 RBAKDNA6NC62 111 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 NUDT3O95989 172 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 NMBP08949 121 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 GCHFRP30047 84 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 TCL1AP56279 114 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 DAZ2Q13117 558 aaKnown RBP5.66□□□□□ -1.5
VTI1B-206ENST00000556461 OR5I1Q13606 314 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 MUC21Q5SSG8 566 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 GOLT1AQ6ZVE7 132 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 UBE2DNLQ8IWF7 75 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 SUN5Q8TC36 379 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
VTI1B-206ENST00000556461 NACAE9PAV3 2078 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 TRGV1A0A0A0MS02 117 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 F6UZH7 168 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 RGS13O14921 159 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 RTL8CO15255 209 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 ARPC5O15511 151 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 SPINK4O60575 86 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 SERF2P84101 59 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 RNF212Q495C1 297 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 Q6AWC8 147 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 C15orf53Q8NAA6 179 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 ZNF680Q8NEM1 530 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 OR11H4Q8NGC9 324 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 CMTM2Q8TAZ6 248 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 RXFP4Q8TDU9 374 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
VTI1B-206ENST00000556461 MDFICQ9P1T7 246 aa5.65□□□□□ -1.5
VTI1B-206ENST00000556461 BORCS7-ASMTA0A0B4J1R7 106 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 GGTLC3B5MD39 225 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 IGHV3-53P01767 116 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 MBP02144 154 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 IBA57Q5T440 356 aaKnown RBP5.64□□□□□ -1.51
VTI1B-206ENST00000556461 Q6ZR54 194 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 TMED6Q8WW62 240 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-206ENST00000556461 VSIG2Q96IQ7 327 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 ST6GAL2Q96JF0 529 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 ARPC5LQ9BPX5 153 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 ACTR3CQ9C0K3 210 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-206ENST00000556461 LINC00588Q9Y4M8 146 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 KIAA1109Q2LD37 5005 aa5.64□□□□□ -1.51
VTI1B-206ENST00000556461 MUC4Q99102 2169 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 TRGV2A0A075B6R0 118 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 GNRH2O43555 120 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 CXorf1O96002 111 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 IGLV2-11P01706 119 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 TCRAP04437 139 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 ZNF80P51504 273 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-206ENST00000556461 FGF8P55075 233 aaPredicted RBP5.63□□□□□ -1.51
VTI1B-206ENST00000556461 SUMO1P63165 101 aaKnown RBP5.63□□□□□ -1.51
VTI1B-206ENST00000556461 TMEM183BQ1AE95 376 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 LGALS9BQ3B8N2 356 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 FAM74A1Q5RGS3 127 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 IQCF2Q8IXL9 164 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 TMEM183AQ8IXX5 376 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 ZNRF2Q8NHG8 242 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 LINC00479Q96M42 142 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 C18orf15Q96N68 181 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 C8orf49Q96NF6 230 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 C11orf21Q9P2W6 132 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 NAGKQ9UJ70 344 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 LENEPQ9Y5L5 61 aa5.63□□□□□ -1.51
VTI1B-206ENST00000556461 DNAH5Q8TE73 4624 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 TRAV34A0A0B4J273 112 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 CTXND1A0A1B0GTU2 59 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 FHITP49789 147 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 UBE2G2P60604 165 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 ZNF415Q09FC8 603 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 ESRGQ1W209 222 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 KCNRGQ8N5I3 272 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 ARL6IP6Q8N6S5 226 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 C5orf17Q8NAS9 161 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 ATG101Q9BSB4 218 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 TREM1Q9NP99 234 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 TMEM167BQ9NRX6 74 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 EPDR1Q9UM22 224 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 PSG8Q9UQ74 426 aa5.62□□□□□ -1.51
VTI1B-206ENST00000556461 A0A096LPF7 62 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 IGHV3-16A0A0C4DH30 117 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 A0A1B0GVY2 172 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 TAAR5O14804 337 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 TYMSP04818 313 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 SFTA3P0C7M3 94 aa5.61□□□□□ -1.51
VTI1B-206ENST00000556461 CCL18P55774 89 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms