RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 VAX2Q9UIW0 290 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 IGHV4-28A0A0C4DH34 117 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 A0A0J9YWU9 116 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 AKR1C3P42330 323 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 TAS2R60P59551 318 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 Q8NAQ8 132 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 TVP23CQ96ET8 276 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 FMC1Q96HJ9 113 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
SNX6-206ENST00000556162 SCO2A0A1W2PP80 73 aa10.22□□□□□ -0.77
SNX6-206ENST00000556162 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
SNX6-206ENST00000556162 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
SNX6-206ENST00000556162 HTN1P15515 57 aa10.22□□□□□ -0.77
SNX6-206ENST00000556162 PRR9Q5T870 116 aa10.22□□□□□ -0.77
SNX6-206ENST00000556162 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
SNX6-206ENST00000556162 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.77
SNX6-206ENST00000556162 DEFB4AO15263 64 aa10.21□□□□□ -0.77
SNX6-206ENST00000556162 PDE6DO43924 150 aa10.21□□□□□ -0.77
SNX6-206ENST00000556162 TMEM183BQ1AE95 376 aa10.21□□□□□ -0.77
SNX6-206ENST00000556162 C2CD4CQ8TF44 421 aa10.21□□□□□ -0.77
SNX6-206ENST00000556162 PCNPQ8WW12 178 aaKnown RBP10.21□□□□□ -0.77
SNX6-206ENST00000556162 PYGO2Q9BRQ0 406 aa10.21□□□□□ -0.77
SNX6-206ENST00000556162 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.78
SNX6-206ENST00000556162 RBFOX3A6NFN3 312 aa10.21□□□□□ -0.78
SNX6-206ENST00000556162 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.78
SNX6-206ENST00000556162 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.78
SNX6-206ENST00000556162 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 TMEM189A5PLL7 270 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 PRM2P04554 102 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 NDUFA5Q16718 116 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 SMUG1Q53HV7 270 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 Q6AWC8 147 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 Q86TA4 180 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 WWC2-AS2Q96NR7 200 aa10.2□□□□□ -0.78
SNX6-206ENST00000556162 RAB14P61106 215 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 EIF5A2Q9GZV4 153 aaKnown RBP10.19□□□□□ -0.78
SNX6-206ENST00000556162 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 TRAV21A0A0B4J279 112 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 RGS13O14921 159 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 GCGP01275 180 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 AZU1P20160 251 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 EMP1P54849 157 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 Q6ZQT7 251 aa10.19□□□□□ -0.78
SNX6-206ENST00000556162 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 LTAP01374 205 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 RPL35P42766 123 aaKnown RBP10.18□□□□□ -0.78
SNX6-206ENST00000556162 TOR2AQ5JU69 321 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 ZNF493Q6ZR52 646 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 ZNF767PQ75MW2 155 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 EIF4E3Q8N5X7 224 aaKnown RBP10.18□□□□□ -0.78
SNX6-206ENST00000556162 LINC00467Q9BRT7 94 aa10.18□□□□□ -0.78
SNX6-206ENST00000556162 DNAH7Q8WXX0 4024 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 CBY3A6NI87 242 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 BAGE2Q86Y30 109 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 TMEM263Q8WUH6 116 aaKnown RBP10.17□□□□□ -0.78
SNX6-206ENST00000556162 C16orf74Q96GX8 76 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 PFN1P07737 140 aaKnown RBP10.17□□□□□ -0.78
SNX6-206ENST00000556162 ZNF80P51504 273 aaPredicted RBP10.17□□□□□ -0.78
SNX6-206ENST00000556162 MUC21Q5SSG8 566 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 TMEM183AQ8IXX5 376 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 DERL1Q9BUN8 251 aa10.17□□□□□ -0.78
SNX6-206ENST00000556162 IFITM2Q01629 132 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 ANXA2RQ3ZCQ2 193 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 COX8CQ7Z4L0 72 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 IL17DQ8TAD2 202 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
SNX6-206ENST00000556162 NAGKQ9UJ70 344 aa10.16□□□□□ -0.78
SNX6-206ENST00000556162 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
SNX6-206ENST00000556162 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
SNX6-206ENST00000556162 TMEM250H0YL14 139 aa10.15□□□□□ -0.78
SNX6-206ENST00000556162 S100A1P23297 94 aa10.15□□□□□ -0.78
SNX6-206ENST00000556162 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
SNX6-206ENST00000556162 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.79
SNX6-206ENST00000556162 NHLRC2Q8NBF2 726 aa10.15□□□□□ -0.79
SNX6-206ENST00000556162 KCNS1Q96KK3 526 aa10.15□□□□□ -0.79
SNX6-206ENST00000556162 RAB19A4D1S5 217 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 NDUFS6O75380 124 aaKnown RBP10.14□□□□□ -0.79
SNX6-206ENST00000556162 GNG4P50150 75 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 TDRG1Q3Y452 100 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 FAM222AQ5U5X8 452 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 DKK2Q9UBU2 259 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 TP53TG3Q9ULZ0 132 aa10.14□□□□□ -0.79
SNX6-206ENST00000556162 TIMM8BQ9Y5J9 83 aaPredicted RBP10.14□□□□□ -0.79
SNX6-206ENST00000556162 TEX48A0A1B0GUV7 120 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 PLAC8L1A1L4L8 177 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 TRGV11A0A075B6L2 103 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 CRIP1P50238 77 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 CEBPGP53567 150 aa10.13□□□□□ -0.79
SNX6-206ENST00000556162 NANOS2P60321 138 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms