RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 RNF212Q495C1 297 aa8.7□□□□□ -1.02
NEK9-202ENST00000553823 OSTCQ9NRP0 149 aa8.7□□□□□ -1.02
NEK9-202ENST00000553823 PKD1L1Q8TDX9 2849 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 A0A087WWC5 75 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 PPP1R2P9O14990 202 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 TSPOP30536 169 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 LEPP41159 167 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 CRIP1P50238 77 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 IBA57Q5T440 356 aaKnown RBP8.69□□□□□ -1.02
NEK9-202ENST00000553823 FAM162BQ5T6X4 162 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 LINC00322Q6ZN03 302 aaPredicted RBP8.69□□□□□ -1.02
NEK9-202ENST00000553823 FAM231DQ6ZW35 169 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 STHQ8IWL8 128 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 C15orf54Q8N8G6 183 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 OR10G8Q8NGN5 311 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 ANAPC16Q96DE5 110 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 DAZAP1Q96EP5 407 aaKnown RBP8.69□□□□□ -1.02
NEK9-202ENST00000553823 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 CTDSP1Q9GZU7 261 aa8.69□□□□□ -1.02
NEK9-202ENST00000553823 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
NEK9-202ENST00000553823 C19orf71A6NCJ1 209 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 H7BYZ3 331 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 J3KRW8 73 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 SH2D1AO60880 128 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 GPX1P07203 203 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 ZNF80P51504 273 aaPredicted RBP8.68□□□□□ -1.02
NEK9-202ENST00000553823 AMTNQ6UX39 209 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 TRPT1Q86TN4 253 aaKnown RBP8.68□□□□□ -1.02
NEK9-202ENST00000553823 NUDT10Q8NFP7 164 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 NUDT11Q96G61 164 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
NEK9-202ENST00000553823 ZMAT5Q9UDW3 170 aaKnown RBP8.68□□□□□ -1.02
NEK9-202ENST00000553823 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
NEK9-202ENST00000553823 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
NEK9-202ENST00000553823 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 KLLNB2CW77 178 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 GATCO43716 136 aaKnown RBP8.67□□□□□ -1.02
NEK9-202ENST00000553823 P01737 135 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
NEK9-202ENST00000553823 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
NEK9-202ENST00000553823 CDKN1BP46527 198 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 PRR9Q5T870 116 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 TMEM242Q9NWH2 141 aa8.67□□□□□ -1.02
NEK9-202ENST00000553823 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 ZNF705GA8MUZ8 300 aaPredicted RBP8.66□□□□□ -1.02
NEK9-202ENST00000553823 M0R2Z0 102 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 SCO1O75880 301 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 PFN1P07737 140 aaKnown RBP8.66□□□□□ -1.02
NEK9-202ENST00000553823 EGFEM1PQ0D2K5 195 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 BTN1A1Q13410 526 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 SPINK13Q1W4C9 94 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 DEFB125Q8N687 156 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 V9GYV3 84 aa8.66□□□□□ -1.02
NEK9-202ENST00000553823 TRAV21A0A0B4J279 112 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 C7orf71A4D174 169 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 FXYD7P58549 80 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 NUTF2P61970 127 aaKnown RBP8.65□□□□□ -1.02
NEK9-202ENST00000553823 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 SAMD5Q5TGI4 173 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 Q6AWC8 147 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 Q8N1Y9 231 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
NEK9-202ENST00000553823 SMCO4Q9NRQ5 59 aa8.65□□□□□ -1.02
NEK9-202ENST00000553823 NOTCH1P46531 2555 aa8.65□□□□□ -1.03
NEK9-202ENST00000553823 TRAV12-2A0A075B6T6 113 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 TMEM189A5PLL7 270 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 G3V4G9 280 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 AMBPP02760 352 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 ORM1P02763 201 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
NEK9-202ENST00000553823 CT83Q5H943 113 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 TMEM88Q6PEY1 159 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 SRD5A3Q9H8P0 318 aa8.64□□□□□ -1.03
NEK9-202ENST00000553823 TRAV12-3A0A0B4J271 114 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 CXorf65A6NEN9 183 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 A8MWL6 223 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 KRTAP10-11P60412 298 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 Q6ZQT7 251 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 CBLN2Q8IUK8 224 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 IMMP2LQ96T52 175 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 TUBA4BQ9H853 241 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 IL36BQ9NZH7 164 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
NEK9-202ENST00000553823 XKRY2A2RUG3 117 aa8.62□□□□□ -1.03
NEK9-202ENST00000553823 CRXO43186 299 aaPredicted RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 RPL19P84098 196 aaKnown RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
NEK9-202ENST00000553823 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
NEK9-202ENST00000553823 NAGKQ9UJ70 344 aa8.62□□□□□ -1.03
NEK9-202ENST00000553823 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
NEK9-202ENST00000553823 IGKV3D-20A0A0C4DH25 116 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms