RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 IGHV3-73A0A0B4J1V6 119 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 FANCD2OSQ96PS1 177 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 F5P12259 2224 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 IGHV1OR15-1A0A075B7D0 117 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 PMS2P5A8MQ11 134 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 NTN3O00634 580 aaPredicted RBP7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 CCL11P51671 97 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 POLEQ07864 2286 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 SRXN1Q9BYN0 137 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 RNF186Q9NXI6 227 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 Q9Y3F1 56 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 QSER1Q2KHR3 1735 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 LINC00473A8K010 186 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 IGKV1-39P01597 117 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 IGKV1D-39P04432 117 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 PAPPAQ13219 1627 aa7.12□□□□□ -1.27
GTF2A1-203ENST00000553612 VPREB1P12018 145 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 GFRALQ6UXV0 394 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 C17orf77Q96MU5 243 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 PLA2G2FQ9BZM2 168 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 METTL26Q96S19 204 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 ZNF407Q9C0G0 2248 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 IGHV3OR16-12A0A075B7B8 117 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 LINC00311Q8N616 119 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 C11orf52Q96A22 123 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 K7EM74 188 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 ANAPC10Q9UM13 185 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 KMT2EQ8IZD2 1858 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 F8VRH5 84 aa7.11□□□□□ -1.27
GTF2A1-203ENST00000553612 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 USP17L23D6RBM5 183 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 RPS28P62857 69 aaKnown RBP7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 FAM216BQ8N7L0 139 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 CXXC4Q9H2H0 198 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 ZNRD1Q9P1U0 126 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 TMEM75Q8N9X5 138 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 F8WEM9 126 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 UBE2L6O14933 153 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 Q96MF0 132 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 PSPHP1O15172 72 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 GFRA3O60609 400 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 FAM27BQ5VT28 67 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 DYNAPQ8N1N2 210 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 C19orf54Q5BKX5 351 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 DPH3P1Q9H4G8 78 aa7.1□□□□□ -1.27
GTF2A1-203ENST00000553612 CLEC19AQ6UXS0 136 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 ODF3Q96PU9 254 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 URB1-AS1Q96HZ7 61 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 GFRA4Q9GZZ7 299 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 ZNF561-AS1K7EIQ3 104 aa7.09□□□□□ -1.27
GTF2A1-203ENST00000553612 SPTBN1Q01082 2364 aaKnown RBP7.09□□□□□ -1.28
GTF2A1-203ENST00000553612 PAPPA-AS1Q5QFB9 102 aa7.09□□□□□ -1.28
GTF2A1-203ENST00000553612 ZNF524Q96C55 264 aa7.09□□□□□ -1.28
GTF2A1-203ENST00000553612 PAX4O43316 350 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 C1orf147Q96MC9 270 aaPredicted RBP7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 Q86TA4 180 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 C14orf132Q9NPU4 83 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 NDUFB3O43676 98 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 CFPP27918 469 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 C14orf178Q8N769 122 aaPredicted RBP7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 LIFP15018 202 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 TNFRSF4P43489 277 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 ARID2Q68CP9 1835 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 FAM90A5PA8MXJ8 464 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 ZNF492Q9P255 531 aa7.08□□□□□ -1.28
GTF2A1-203ENST00000553612 A0A1W2PQD3 144 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 CDSNQ15517 529 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 DAND5Q8N907 189 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 UBL5Q9BZL1 73 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 HELZP42694 1942 aaKnown RBP7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 IGF2BP2-AS1Q96M15 143 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 ZCCHC24Q8N2G6 241 aaKnown RBP7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 SAA2P0DJI9 122 aaPredicted RBP7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 Q9HAA7 133 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 ZMAT4Q9H898 229 aa7.07□□□□□ -1.28
GTF2A1-203ENST00000553612 PCOLCEQ15113 449 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 PKDREJQ9NTG1 2253 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 ABCA1O95477 2261 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 ADAMTSL3P82987 1691 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 TNRC6CQ9HCJ0 1690 aaKnown RBP7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 CD28P10747 220 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 DKK4Q9UBT3 224 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 C16orf97H3BN30 126 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 GLI3P10071 1580 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 CENPFP49454 3210 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 Q8N8P6 123 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 MDFIQ99750 246 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 A0A087WWL8 130 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 LINC01559Q495D7 138 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 FXYD5Q96DB9 178 aa7.06□□□□□ -1.28
GTF2A1-203ENST00000553612 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms