RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FAM208AQ9UK61 1670 aaKnown RBP2.73□□□□□ -1.97
USP44-208ENST00000552440 IGHV3-15A0A0B4J1V0 119 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 A0A1W2PQD3 144 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 APOC4-APOC2K7ER74 178 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 APOC2P02655 101 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 RBP4P02753 201 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 CD3DP04234 171 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 TPT1P13693 172 aaKnown RBP2.73□□□□□ -1.97
USP44-208ENST00000552440 RPL28P46779 137 aaKnown RBP2.73□□□□□ -1.97
USP44-208ENST00000552440 XCL1P47992 114 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 UBE2SQ16763 222 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 KHDC3LQ587J8 217 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 Q6AWC8 147 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 LCN9Q8WX39 176 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 PRO1933Q9H354 126 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 ANKRD26Q9UPS8 1709 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 NOP16Q9Y3C1 178 aaKnown RBP2.73□□□□□ -1.97
USP44-208ENST00000552440 PAPPA2Q9BXP8 1791 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 NUP205Q92621 2012 aa2.73□□□□□ -1.97
USP44-208ENST00000552440 IGKV1D-37A0A075B6S9 117 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 TCRBV3S1A0A5B6 114 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 PMP2P02689 132 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 MSMBP08118 114 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 SLC25A4P12235 298 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 CD24P25063 80 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 MPV17P39210 176 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 BLCAPP62952 87 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 EBI3Q14213 229 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 DPPA3Q6W0C5 159 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 OR4X2Q8NGF9 303 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 MRPS24Q96EL2 167 aaKnown RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 IMMP2LQ96T52 175 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 DPY30Q9C005 99 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 BCL2L10Q9HD36 194 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 RPL26L1Q9UNX3 145 aaKnown RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 SERP1Q9Y6X1 66 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 TP53BP1Q12888 1972 aaPredicted RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 NUP98P52948 1817 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 ANKRD12Q6UB98 2062 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 MYH9P35579 1960 aaKnown RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 C3orf85A0A1B0GTC6 90 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 SDCBPO00560 298 aaPredicted RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 CREBL2O60519 120 aaPredicted RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 ZNF705BP0CI00 300 aaPredicted RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 CRYGAP11844 174 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 CCL4P13236 92 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 FABP4P15090 132 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 ZNF846Q147U1 533 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 FAM229BQ4G0N7 80 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.72□□□□□ -1.97
USP44-208ENST00000552440 Q8NDZ9 215 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 FGF13Q92913 245 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 MRC1P22897 1456 aa2.72□□□□□ -1.97
USP44-208ENST00000552440 SCN11AQ9UI33 1791 aa2.71□□□□□ -1.97
USP44-208ENST00000552440 SLX4Q8IY92 1834 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 A0A096LNJ9 63 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 TRGV5A0A0B4J1U4 118 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 C17orf98A8MV24 154 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 OOSP1A8MZH6 123 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 MCRIP1C9JLW8 97 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 K7EM74 188 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 YPEL1O60688 119 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 NFYAP23511 347 aaPredicted RBP2.71□□□□□ -1.98
USP44-208ENST00000552440 FUSP35637 526 aaKnown RBP eCLIP2.71□□□□□ -1.98
USP44-208ENST00000552440 PCBD1P61457 104 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 IGFL3Q6UXB1 125 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 Q6ZQT7 251 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 OR5AS1Q8N127 324 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 DYNAPQ8N1N2 210 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 RPRMLQ8N4K4 120 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 C1orf64Q8NEQ6 169 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 OTOSQ8NHW6 89 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 AQP3Q92482 292 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 CHCHD1Q96BP2 118 aaKnown RBP2.71□□□□□ -1.98
USP44-208ENST00000552440 RNF5Q99942 180 aa2.71□□□□□ -1.98
USP44-208ENST00000552440 EDC4Q6P2E9 1401 aaKnown RBP2.71□□□□□ -1.98
USP44-208ENST00000552440 COL5A3P25940 1745 aaPredicted RBP2.71□□□□□ -1.98
USP44-208ENST00000552440 TDRD6O60522 2096 aaKnown RBP2.7□□□□□ -1.98
USP44-208ENST00000552440 DOCK8Q8NF50 2099 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 AFDNP55196 1824 aaKnown RBP2.7□□□□□ -1.98
USP44-208ENST00000552440 TRBV6-6A0A0A6YYG2 114 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 A0A1W2PRS3 328 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 C7orf66A4D0T2 115 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 TMEM262E9PQX1 116 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 M0R2P5 195 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 TIMM17BO60830 172 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 ZNF737O75373 536 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 IGLV1-47P01700 117 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 TRACP01848 142 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 FOXF1Q12946 379 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 CIRBPQ14011 172 aaKnown RBP2.7□□□□□ -1.98
USP44-208ENST00000552440 SS18Q15532 418 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 Q5W150 140 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 CCL4L1Q8NHW4 92 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 LSM10Q969L4 123 aaKnown RBP2.7□□□□□ -1.98
USP44-208ENST00000552440 TAS2R4Q9NYW5 299 aa2.7□□□□□ -1.98
USP44-208ENST00000552440 PKD1L2Q7Z442 2459 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms