RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
LINC02388-201ENST00000550678 CACNA1IQ9P0X4 2223 aa4.92□□□□□ -1.62
LINC02388-201ENST00000550678 TRAV8-1A0A0A6YYK1 113 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 EPOPA6NHQ4 379 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 LST1O00453 97 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 COL8A2P25067 703 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 FGF12P61328 243 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 HBBP68871 147 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 SS18Q15532 418 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 IL1F10Q8WWZ1 152 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 ZNF747Q9BV97 191 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 TMEM167BQ9NRX6 74 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 ZNF355PQ9NSJ1 428 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 RAI1Q7Z5J4 1906 aaPredicted RBP4.91□□□□□ -1.62
LINC02388-201ENST00000550678 MYO7BQ6PIF6 2116 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 DOCK7Q96N67 2140 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 IGLL5B9A064 214 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 FOLR3P41439 243 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 FXYD2P54710 66 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 SPINK9Q5DT21 86 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 C10orf128Q5T292 105 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 PRNTQ86SH4 94 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 SBSPONQ8IVN8 264 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 CCL4L1Q8NHW4 92 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 ODF3Q96PU9 254 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 MAP6D1Q9H9H5 199 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 PLEKHA3Q9HB20 300 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 LINC00527Q9UJ94 153 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 THADAQ6YHU6 1953 aa4.91□□□□□ -1.62
LINC02388-201ENST00000550678 HIGD1CA8MV81 97 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 KLLNB2CW77 178 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 K7ERJ3 54 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 CCL16O15467 120 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.63
LINC02388-201ENST00000550678 ZNF80P51504 273 aaPredicted RBP4.9□□□□□ -1.63
LINC02388-201ENST00000550678 ZNF843Q8N446 348 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 PRSS33Q8NF86 280 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 MYOZ3Q8TDC0 251 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 HIGD1BQ9P298 99 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 KIAA1549Q9HCM3 1950 aa4.9□□□□□ -1.63
LINC02388-201ENST00000550678 TRAV2A0A0B4J234 112 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 MGST3O14880 152 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 UBE2L6O14933 153 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 LINC00271P0C7V0 271 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 CD24P25063 80 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 ZNF138P52744 262 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 RPS21P63220 83 aaKnown RBP4.89□□□□□ -1.63
LINC02388-201ENST00000550678 SRSF9Q13242 221 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC02388-201ENST00000550678 MIR17HGQ75NE6 70 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 RNF185Q96GF1 192 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 TIMM17AQ99595 171 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 MOB4Q9Y3A3 225 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 SPAG17Q6Q759 2223 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 TCRBV4S1A1TA0A5B7 111 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 NDUFB3O43676 98 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 MP68P56378 58 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 LINC00313P59037 77 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 UPK3BQ9BT76 320 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 CHAC1Q9BUX1 264 aa4.89□□□□□ -1.63
LINC02388-201ENST00000550678 TIMM8BQ9Y5J9 83 aaPredicted RBP4.89□□□□□ -1.63
LINC02388-201ENST00000550678 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 PGPA6NDG6 321 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 TMEM256-PLSCR3K7ERE1 68 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 IGHV4-31P0DP07 118 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
LINC02388-201ENST00000550678 RPL30P62888 115 aaKnown RBP4.88□□□□□ -1.63
LINC02388-201ENST00000550678 KRTAP27-1Q3LI81 207 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 LCA10Q71F78 164 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
LINC02388-201ENST00000550678 CALYQ9NYX4 217 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 DEC1Q9P2X7 70 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 EML6Q6ZMW3 1958 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 GON4LQ3T8J9 2241 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 CEP350Q5VT06 3117 aa4.88□□□□□ -1.63
LINC02388-201ENST00000550678 IGKV3D-11A0A0A0MRZ8 115 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 C17orf98A8MV24 154 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 PRR3P79522 188 aaKnown RBP4.87□□□□□ -1.63
LINC02388-201ENST00000550678 EIF4EBP1Q13541 118 aaPredicted RBP4.87□□□□□ -1.63
LINC02388-201ENST00000550678 PSMG4Q5JS54 123 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 FAM27BQ5VT28 67 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 Q8N2B8 174 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 ATOX1O00244 68 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 FSTL3O95633 263 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 IGLV1-40P01703 118 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 BRWD1-AS2P59051 145 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 MRPS36P82909 103 aaKnown RBP4.87□□□□□ -1.63
LINC02388-201ENST00000550678 ATP1A1-AS1Q5TC04 95 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 RPRMLQ8N4K4 120 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.87□□□□□ -1.63
LINC02388-201ENST00000550678 ZNF491Q8N8L2 437 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 RFESDQ8TAC1 157 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 PATE1Q8WXA2 126 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 KRTAP9-8Q9BYQ0 159 aa4.87□□□□□ -1.63
LINC02388-201ENST00000550678 NCOA6Q14686 2063 aaPredicted RBP4.86□□□□□ -1.63
LINC02388-201ENST00000550678 TRAV17A0A0B4J275 112 aa4.86□□□□□ -1.63
LINC02388-201ENST00000550678 LOC389332A0A1B0GUA5 103 aa4.86□□□□□ -1.63
LINC02388-201ENST00000550678 C16orf97H3BN30 126 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms