RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TRAV40A0A0B4J280 105 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 KLRD1Q13241 179 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 C5orf64Q2M2E5 130 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
HDAC7-228ENST00000548938 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
HDAC7-228ENST00000548938 MRPL35Q9NZE8 188 aaKnown RBP10.63□□□□□ -0.71
HDAC7-228ENST00000548938 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 TRGV3P03979 118 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 KLRB1Q12918 225 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 IGLV2-18A0A075B6J9 118 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 ATP5LO75964 103 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 WFDC2Q14508 124 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 Q8N8P6 123 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 NPBQ8NG41 125 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 DPM3Q9P2X0 92 aa10.62□□□□□ -0.71
HDAC7-228ENST00000548938 E9PLD3 99 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 AZU1P20160 251 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 SRSF2Q01130 221 aaKnown RBP10.61□□□□□ -0.71
HDAC7-228ENST00000548938 IL17RELQ6ZVW7 336 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 IGLL5B9A064 214 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 CTSGP08311 255 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 RNF182Q8N6D2 247 aa10.61□□□□□ -0.71
HDAC7-228ENST00000548938 COL6A6A6NMZ7 2263 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 C1orf122Q6ZSJ8 110 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
HDAC7-228ENST00000548938 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 TSSC4Q9Y5U2 329 aaPredicted RBP10.6□□□□□ -0.71
HDAC7-228ENST00000548938 WNK2Q9Y3S1 2297 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 CACNA1AO00555 2505 aa10.6□□□□□ -0.71
HDAC7-228ENST00000548938 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 B9A039 149 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 H3BMG7 143 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 HLA-DRB4P13762 266 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 FOXI2Q6ZQN5 318 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 HLA-DRB4X5D2U9 266 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 SVEP1Q4LDE5 3571 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 AGRNO00468 2067 aa10.59□□□□□ -0.71
HDAC7-228ENST00000548938 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
HDAC7-228ENST00000548938 NCBP2LA6PVI3 153 aaKnown RBP10.58□□□□□ -0.72
HDAC7-228ENST00000548938 EFNA4P52798 201 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 AMTNQ6UX39 209 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 LY6HO94772 140 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 SRSF1Q07955 248 aaKnown RBP eCLIP10.58□□□□□ -0.729e-8■□□□□ 9.9
HDAC7-228ENST00000548938 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 NRACQ8N912 160 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 OR11H6Q8NGC7 330 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 UFC1Q9Y3C8 167 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 ITPR1Q14643 2758 aa10.58□□□□□ -0.72
HDAC7-228ENST00000548938 LY6G5BQ8NDX9 201 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 ANKHD1Q8IWZ3 2542 aaKnown RBP10.57□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 CCL21O00585 134 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 LAGE3Q14657 143 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 GAGE12HA6NDE8 117 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 F8W1H4 67 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 CD3EP07766 207 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 HIST1H4GQ99525 98 aa10.57□□□□□ -0.72
HDAC7-228ENST00000548938 A0A087WX48 190 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 FAM90A27PA6NNH2 459 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 CD300EQ496F6 205 aaPredicted RBP10.56□□□□□ -0.72
HDAC7-228ENST00000548938 ZNF672Q499Z4 452 aaPredicted RBP10.56□□□□□ -0.72
HDAC7-228ENST00000548938 Q6ZQT7 251 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 GRNP28799 593 aaKnown RBP10.56□□□□□ -0.72
HDAC7-228ENST00000548938 LY6DQ14210 128 aa10.56□□□□□ -0.72
HDAC7-228ENST00000548938 PKD1L2Q7Z442 2459 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 ABCA4P78363 2273 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 ODF3BA8MYP8 253 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
HDAC7-228ENST00000548938 AGPAT4-IT1Q9H0P7 198 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.55□□□□□ -0.72
HDAC7-228ENST00000548938 CDSNQ15517 529 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 TAL2Q16559 108 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 LINC01560Q8TB33 94 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 PRORYQ9H606 182 aa10.55□□□□□ -0.72
HDAC7-228ENST00000548938 TRBV7-3A0A075B6L6 115 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 SCGB2A1O75556 95 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 BUB3O43684 328 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 PLNP26678 52 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 ADORA2A-AS1P86434 159 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 CACNA1BQ00975 2339 aa10.54□□□□□ -0.72
HDAC7-228ENST00000548938 J3QR89 54 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms