RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 J3KRW8 73 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 HTN3P15516 51 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
SSH1-204ENST00000546697 ZNF345Q14585 488 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 Q6ZR54 194 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 Q8TAT8 98 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 SH3BGRL3Q9H299 93 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 CYTL1Q9NRR1 136 aa10.72□□□□□ -0.69
SSH1-204ENST00000546697 NACAE9PAV3 2078 aa10.71□□□□□ -0.69
SSH1-204ENST00000546697 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
SSH1-204ENST00000546697 GCHFRP30047 84 aa10.71□□□□□ -0.69
SSH1-204ENST00000546697 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
SSH1-204ENST00000546697 GSN-AS1Q9NRJ2 163 aa10.71□□□□□ -0.69
SSH1-204ENST00000546697 TMEM167BQ9NRX6 74 aa10.71□□□□□ -0.69
SSH1-204ENST00000546697 KLF12Q9Y4X4 402 aa10.71□□□□□ -0.69
SSH1-204ENST00000546697 HMSDA8MTL9 139 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 F5H768 121 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 CXorf1O96002 111 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 HOXA5P20719 270 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 Q6ZQT7 251 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 Q6ZTI0 123 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 C5orf17Q8NAS9 161 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 CMTM2Q8TAZ6 248 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 PKHD1P08F94 4074 aa10.7□□□□□ -0.7
SSH1-204ENST00000546697 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
SSH1-204ENST00000546697 FBLL1A6NHQ2 334 aaKnown RBP10.69□□□□□ -0.7
SSH1-204ENST00000546697 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
SSH1-204ENST00000546697 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
SSH1-204ENST00000546697 TVP23CQ96ET8 276 aa10.69□□□□□ -0.7
SSH1-204ENST00000546697 MUC4Q99102 2169 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GAGE12BA1L429 117 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GGTLC3B5MD39 225 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 RGS13O14921 159 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 HMGB3O15347 200 aaKnown RBP10.68□□□□□ -0.7
SSH1-204ENST00000546697 GAGE7O76087 117 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 TCRAP04437 139 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GAGE12FP0CL80 117 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GAGE12GP0CL81 117 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GAGE12IP0CL82 117 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 GOLT1AQ6ZVE7 132 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 KCNRGQ8N5I3 272 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 DNAH11Q96DT5 4516 aa10.68□□□□□ -0.7
SSH1-204ENST00000546697 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
SSH1-204ENST00000546697 ARPC5O15511 151 aa10.67□□□□□ -0.7
SSH1-204ENST00000546697 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
SSH1-204ENST00000546697 RASL10AQ92737 203 aa10.67□□□□□ -0.7
SSH1-204ENST00000546697 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 HYLS1Q96M11 299 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 SPXQ9BT56 116 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 UPK3BQ9BT76 320 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 NKX6-2Q9C056 277 aaPredicted RBP10.66□□□□□ -0.7
SSH1-204ENST00000546697 TMPRSS5Q9H3S3 457 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
SSH1-204ENST00000546697 HERC2O95714 4834 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 TRAV26-1A0A087WT03 109 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 TRAV8-1A0A0A6YYK1 113 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 OR11H4Q8NGC9 324 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 ARPC5LQ9BPX5 153 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 ATG101Q9BSB4 218 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.7
SSH1-204ENST00000546697 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 RTL8CO15255 209 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 SEC11BP0C7V7 166 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
SSH1-204ENST00000546697 GNG5P63218 68 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 FAM159AQ6UWV7 190 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 CYB561D1Q8N8Q1 229 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 TREM1Q9NP99 234 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
SSH1-204ENST00000546697 TRGV2A0A075B6R0 118 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 A0A0D9SG52 128 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 A0A1B0GVY2 172 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 K7EQM0 130 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 FHITP49789 147 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 CCL18P55774 89 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 SLAQ13239 276 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 AKR1C8PQ5T2L2 129 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
SSH1-204ENST00000546697 IGHV3-16A0A0C4DH30 117 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 NUDT3O95989 172 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
SSH1-204ENST00000546697 OR5I1Q13606 314 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 PTH2Q96A98 100 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 PSG8Q9UQ74 426 aa10.62□□□□□ -0.71
SSH1-204ENST00000546697 A0A096LPF7 62 aa10.61□□□□□ -0.71
SSH1-204ENST00000546697 FAM74A7A6NL05 159 aa10.61□□□□□ -0.71
SSH1-204ENST00000546697 UMAD1C9J7I0 102 aa10.61□□□□□ -0.71
SSH1-204ENST00000546697 SMLR1H3BR10 107 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms