RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 FAM19A4Q96LR4 140 aa14.5□□□□□ -0.09
SKP2-208ENST00000546211 GFRA4Q9GZZ7 299 aa14.5□□□□□ -0.09
SKP2-208ENST00000546211 TMEM189A5PLL7 270 aa14.49□□□□□ -0.09
SKP2-208ENST00000546211 TYMSP04818 313 aa14.49□□□□□ -0.09
SKP2-208ENST00000546211 NEU1Q99519 415 aa14.49□□□□□ -0.09
SKP2-208ENST00000546211 MAP6D1Q9H9H5 199 aa14.49□□□□□ -0.09
SKP2-208ENST00000546211 ZNF256Q9Y2P7 627 aaPredicted RBP14.49□□□□□ -0.09
SKP2-208ENST00000546211 XKRY2A2RUG3 117 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 FAM231BA6NCW3 169 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 GPX1P07203 203 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 CRISP2P16562 243 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 PRIMA1Q86XR5 153 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 ZFAND2AQ8N6M9 145 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 ODF3Q96PU9 254 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 SRD5A3Q9H8P0 318 aa14.48□□□□□ -0.09
SKP2-208ENST00000546211 HIGD1CA8MV81 97 aa14.47□□□□□ -0.09
SKP2-208ENST00000546211 J3KRW8 73 aa14.47□□□□□ -0.09
SKP2-208ENST00000546211 RPS20P60866 119 aaKnown RBP14.47□□□□□ -0.09
SKP2-208ENST00000546211 ORM1P02763 201 aa14.47□□□□□ -0.09
SKP2-208ENST00000546211 LEPP41159 167 aa14.47□□□□□ -0.09
SKP2-208ENST00000546211 NUP35Q8NFH5 326 aa14.47□□□□□ -0.09
SKP2-208ENST00000546211 TMSB15BA0A087X1C1 80 aa14.46□□□□□ -0.09
SKP2-208ENST00000546211 C1orf196B1AJZ1 125 aa14.46□□□□□ -0.09
SKP2-208ENST00000546211 GZMBP10144 247 aa14.46□□□□□ -0.09
SKP2-208ENST00000546211 PRR9Q5T870 116 aa14.46□□□□□ -0.09
SKP2-208ENST00000546211 APRG1Q8IVJ8 170 aa14.46□□□□□ -0.09
SKP2-208ENST00000546211 TRAV21A0A0B4J279 112 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 SPINK4O60575 86 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 IGKV3-20P01619 116 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 CMC4P56277 68 aaPredicted RBP14.45□□□□□ -0.1
SKP2-208ENST00000546211 LINC01559Q495D7 138 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 ACTL10Q5JWF8 245 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 GTSF1Q8WW33 167 aa14.45□□□□□ -0.1
SKP2-208ENST00000546211 HLA-DRB4P13762 266 aa14.44□□□□□ -0.1
SKP2-208ENST00000546211 TSPOP30536 169 aa14.44□□□□□ -0.1
SKP2-208ENST00000546211 RNASE4P34096 147 aaKnown RBP14.44□□□□□ -0.1
SKP2-208ENST00000546211 Q6AWC8 147 aa14.44□□□□□ -0.1
SKP2-208ENST00000546211 ZNF747Q9BV97 191 aa14.44□□□□□ -0.1
SKP2-208ENST00000546211 HLA-DRB4X5D2U9 266 aa14.44□□□□□ -0.1
SKP2-208ENST00000546211 KLLNB2CW77 178 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 OR11H12B2RN74 326 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 INSL3P51460 131 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 FOXA3P55318 350 aaPredicted RBP14.43□□□□□ -0.1
SKP2-208ENST00000546211 RAB5BP61020 215 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 ODF3L2Q3SX64 289 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 MRPL54Q6P161 138 aaKnown RBP14.43□□□□□ -0.1
SKP2-208ENST00000546211 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 NIPBLQ6KC79 2804 aaeCLIP14.43□□□□□ -0.1
SKP2-208ENST00000546211 H3BMM0 161 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 COX19Q49B96 90 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 C9orf66Q5T8R8 295 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 C3orf56Q8N813 242 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 JMJD1CQ15652 2540 aa14.43□□□□□ -0.1
SKP2-208ENST00000546211 WNK1Q9H4A3 2382 aa14.42□□□□□ -0.1
SKP2-208ENST00000546211 TRGC2P03986 189 aa14.42□□□□□ -0.1
SKP2-208ENST00000546211 ZNF124Q15973 351 aa14.42□□□□□ -0.1
SKP2-208ENST00000546211 ATP5L2Q7Z4Y8 100 aa14.42□□□□□ -0.1
SKP2-208ENST00000546211 CDKN1BP46527 198 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 WDR73Q6P4I2 378 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 RASL11AQ6T310 242 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 C12orf54Q6X4T0 127 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 TMEM158Q8WZ71 300 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 C11orf21Q9P2W6 132 aa14.41□□□□□ -0.1
SKP2-208ENST00000546211 IGKV3D-20A0A0C4DH25 116 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 A8MTW9 85 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 KIR3DS1Q14943 382 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 BEAN1Q3B7T3 259 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 AMTNQ6UX39 209 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 BORCS7Q96B45 105 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 MCRIP2Q9BUT9 160 aaKnown RBP14.4□□□□□ -0.1
SKP2-208ENST00000546211 TPPP3Q9BW30 176 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 TRAPPC1Q9Y5R8 145 aa14.4□□□□□ -0.1
SKP2-208ENST00000546211 C7orf71A4D174 169 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 M0R2Z0 102 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 SPINK13Q1W4C9 94 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 Q6ZQT7 251 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 ZFP82Q8N141 532 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 FAM110AQ9BQ89 295 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 NAGKQ9UJ70 344 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 GRIFINA4D1Z8 144 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 SNURFLB1AK76 121 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 RAB4BP61018 213 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 SHISA2Q6UWI4 295 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 FER1L6-AS1Q8NA97 138 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 GNB1LQ9BYB4 327 aa14.39□□□□□ -0.11
SKP2-208ENST00000546211 A0A1B0GUT8 65 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 MT-ND6P03923 174 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 FRMD6-AS1P0C7T7 363 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 GFI1BQ5VTD9 330 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 LYZL1Q6UWQ5 148 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 STHQ8IWL8 128 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 FRZBQ92765 325 aa14.38□□□□□ -0.11
SKP2-208ENST00000546211 TEP1Q99973 2627 aaKnown RBP14.38□□□□□ -0.11
SKP2-208ENST00000546211 TRAV12-2A0A075B6T6 113 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 TRAV12-3A0A0B4J271 114 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 IGLC6P0CF74 106 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 HBBP68871 147 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 FABP9Q0Z7S8 132 aa14.37□□□□□ -0.11
SKP2-208ENST00000546211 RIGQ13278 110 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms