RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CRYBA1P05813 215 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 RNASE2P10153 161 aaKnown RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 GABRA2P47869 451 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 DAD1P61803 113 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 HERVK_113P63121 156 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TNFRSF9Q07011 255 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 APOFQ13790 326 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 DIAPH2-AS1Q14236 149 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 KCNJ8Q15842 424 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 C12orf73Q69YU5 71 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 SLC36A1Q7Z2H8 476 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TMED4Q7Z7H5 227 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 OR4S1Q8NGB4 309 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 OR4X1Q8NH49 305 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 UBE2WQ96B02 151 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TBX5Q99593 518 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 ALX4Q9H161 411 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 OR2D2Q9H210 308 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 MRPL27Q9P0M9 148 aaKnown RBP1.94□□□□□ -2.1
SCFD1-207ENST00000544052 SS18L2Q9UHA2 77 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 SMPXQ9UHP9 88 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 UFC1Q9Y3C8 167 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 TRAPPC1Q9Y5R8 145 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 U3KQK5 164 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 STAB2Q8WWQ8 2551 aa1.94□□□□□ -2.1
SCFD1-207ENST00000544052 SORL1Q92673 2214 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 TMEM269A0A1B0GVZ9 245 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 OR5H14A6NHG9 310 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 J3QRE1 110 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 HRES1P13985 223 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 MYL12AP19105 171 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 GNG3P63215 75 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 FABP5Q01469 135 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 SCGB1D4Q6XE38 83 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 DHFR2Q86XF0 187 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 PACRGLQ8N7B6 248 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 LINC00304Q8N9R0 145 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 WFDC9Q8NEX5 89 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 OR11H6Q8NGC7 330 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 OR5A2Q8NGI9 324 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 OR51A4Q8NGJ6 313 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 ADAT3Q96EY9 351 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-207ENST00000544052 YIPF3Q9GZM5 350 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 CHST6Q9GZX3 395 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 ZNF286AQ9HBT8 521 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 TVP23BQ9NYZ1 205 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 LINC00527Q9UJ94 153 aa1.93□□□□□ -2.1
SCFD1-207ENST00000544052 NOP16Q9Y3C1 178 aaKnown RBP1.93□□□□□ -2.1
SCFD1-207ENST00000544052 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 B4DEV8 164 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 LY6LH3BQJ8 138 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 PIN1P1O15428 100 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 IFNGP01579 166 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 RPS20P60866 119 aaKnown RBP1.92□□□□□ -2.1
SCFD1-207ENST00000544052 CDK5R1Q15078 307 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 KRTAP25-1Q3LHN0 102 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 ZNF322Q6U7Q0 402 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-207ENST00000544052 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 OR10K1Q8NGX5 313 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 OR2T27Q8NH04 317 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 SFRP2Q96HF1 295 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 CMSS1Q9BQ75 279 aaKnown RBP1.92□□□□□ -2.1
SCFD1-207ENST00000544052 OR52A1Q9UKL2 312 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 HILPDAQ9Y5L2 63 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 R4GMQ9 66 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 TENM2Q9NT68 2774 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 ALMS1Q8TCU4 4167 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 LOC107986453A0A1B0GWG9 222 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 M0R381 172 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 FAM107AO95990 144 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 IGHV3-7P01780 117 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 APOC1P02654 83 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 ZNF728P0DKX0 622 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 DYNLT3P51808 116 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 EDDM3BP56851 147 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 GABARAPL2P60520 117 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 FLI1Q01543 452 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-207ENST00000544052 MMDQ15546 238 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 SMIM21Q3B7S5 101 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 XAF1Q6GPH4 301 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 SLC25A26Q70HW3 274 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 C1orf158Q8N1D5 194 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 DEFB125Q8N687 156 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 LEAP2Q969E1 77 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 B9D2Q9BPU9 175 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 TMEM133Q9H2Q1 129 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 DUSP21Q9H596 190 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 RASL12Q9NYN1 266 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 DOK5Q9P104 306 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 ANAPC10Q9UM13 185 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 PHLDA3Q9Y5J5 127 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 PXMP4Q9Y6I8 212 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 TNCP24821 2201 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 FRAS1Q86XX4 4008 aa1.92□□□□□ -2.1
SCFD1-207ENST00000544052 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
SCFD1-207ENST00000544052 OR4C45A6NMZ5 311 aa1.91□□□□□ -2.1
SCFD1-207ENST00000544052 OR2H2O95918 312 aa1.91□□□□□ -2.1
SCFD1-207ENST00000544052 RBP4P02753 201 aa1.91□□□□□ -2.1
SCFD1-207ENST00000544052 HMGN1P05114 100 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms