RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 IL17RELQ6ZVW7 336 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 CITED1Q99966 193 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 AGPAT4-IT1Q9H0P7 198 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV3-66A0A0C4DH42 116 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 TMEM8BA6NDV4 472 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 A6NDX4 124 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 LINC01546A6NGU7 62 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 NDUFA4O00483 81 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 IGHG2P01859 326 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 HBDP02042 147 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 TRGV3P03979 118 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 MALP21145 153 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 CKS2P33552 79 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 STPG4Q8N801 248 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 USMG5Q96IX5 58 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 SCRT2Q9NQ03 307 aa5.02□□□□□ -1.61
PTPRO-208ENST00000542557 hDV102S1A0JD36 115 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 NPYP01303 97 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 G0S2P27469 103 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 PPIFP30405 207 aaKnown RBP5.01□□□□□ -1.61
PTPRO-208ENST00000542557 Q5PR19 223 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 SLC25A34Q6PIV7 304 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 BRD3OSQ6XYD6 125 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 CSMD1Q96PZ7 3565 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 ASH1LQ9NR48 2969 aaKnown RBP5.01□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV3OR16-10A0A075B7F0 116 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 TCF21O43680 179 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV4-38-2P0DP08 117 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 LOXL1Q08397 574 aaPredicted RBP5.01□□□□□ -1.61
PTPRO-208ENST00000542557 LGALS9BQ3B8N2 356 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 LGALS9CQ6DKI2 356 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 KRTAP3-2Q9BYR7 98 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
PTPRO-208ENST00000542557 IGKV3D-20A0A0C4DH25 116 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MSMBP08118 114 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 FAM106AQ4KMX7 169 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MAP1LC3AQ9H492 121 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MED13LQ71F56 2210 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV4-4A0A075B6R2 117 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV3OR16-13A0A075B7E8 117 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV4-30-2A0A087WSY4 118 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV3-74A0A0B4J1X5 117 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MUC21A0A0G2JKD1 596 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MUC21A0A140T8X8 626 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 LOC389332A0A1B0GUA5 103 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 ZNF207O43670 478 aaKnown RBP5□□□□□ -1.61
PTPRO-208ENST00000542557 TFPI2P48307 235 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 ATP5J2P56134 94 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 MUC21Q5SSG8 566 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 C11orf21Q9P2W6 132 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 PKD1L2Q7Z442 2459 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV3-49A0A0A0MS15 119 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 IGHV7-4-1A0A0J9YVY3 117 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 H3BUX3 64 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 SOCS3O14543 225 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 SNAI2O43623 268 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 HINT1P49773 126 aaPredicted RBP5□□□□□ -1.61
PTPRO-208ENST00000542557 SHISA2Q6UWI4 295 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 LRRC75A-AS1Q8N1F1 130 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 DEFB125Q8N687 156 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 ORAOV1Q8WV07 137 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 NXT2Q9NPJ8 142 aaKnown RBP5□□□□□ -1.61
PTPRO-208ENST00000542557 MSRB1Q9NZV6 116 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 LINC00527Q9UJ94 153 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 GOLT1BQ9Y3E0 138 aa5□□□□□ -1.61
PTPRO-208ENST00000542557 CACNA1AO00555 2505 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 SMKR1H3BMG3 65 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 OVOL1O14753 267 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 NCR2O95944 276 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 COX8AP10176 69 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 GATA3P23771 443 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 DSCR9P59020 149 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 CACNG7P62955 275 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 PRSS57Q6UWY2 283 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 GPHB5Q86YW7 130 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 A0A087WWL8 130 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 B4DSR2 109 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 IGLV1-40P01703 118 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 CFHR3Q02985 330 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 UNQ9165/PRO28630Q6UXU0 137 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 OR8A1Q8NGG7 326 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 OR1N2Q8NGR9 330 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 IFI27L1Q96BM0 104 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 LINC00477Q96M19 166 aa4.99□□□□□ -1.61
PTPRO-208ENST00000542557 GEMIN7Q9H840 131 aaKnown RBP4.99□□□□□ -1.61
PTPRO-208ENST00000542557 TIMM8BQ9Y5J9 83 aaPredicted RBP4.99□□□□□ -1.61
PTPRO-208ENST00000542557 A0A0G2JLM5 398 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 TRBV7-9A0A0J9YWB2 115 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 TRBV12-3P01733 135 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 FOXE3Q13461 319 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 LY6EQ16553 131 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 C12orf54Q6X4T0 127 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 SMIM15Q7Z3B0 74 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 ZNF738Q8NE65 137 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
PTPRO-208ENST00000542557 MCRIP2Q9BUT9 160 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms