RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 GFI1BQ5VTD9 330 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 COMMD7Q86VX2 200 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 SBSPONQ8IVN8 264 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 TMEM183AQ8IXX5 376 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 CSNK1G2-AS1Q8NCQ2 148 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 B9D2Q9BPU9 175 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 C9JQL5 133 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 KIR3DS1Q14943 382 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 CENPWQ5EE01 88 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 SMIM12Q96EX1 92 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 C8orf49Q96NF6 230 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 RCHY1Q96PM5 261 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 GOLT1BQ9Y3E0 138 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 DEFB135Q30KP9 77 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 COX8CQ7Z4L0 72 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 NIPSNAP3BQ9BS92 247 aa16.85■□□□□ 0.29
HOMER3-205ENST00000542541 TRAV12-3A0A0B4J271 114 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 C9JCJ5 164 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 FAM74A3Q4VXF1 159 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 TMEM256Q8N2U0 113 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 EIF4E3Q8N5X7 224 aaKnown RBP16.84■□□□□ 0.29
HOMER3-205ENST00000542541 SMIM7Q9BQ49 75 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 TMEM208Q9BTX3 173 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 TP53TG1Q9Y2A0 90 aa16.84■□□□□ 0.29
HOMER3-205ENST00000542541 ZNF727A8MUV8 499 aa16.83■□□□□ 0.28
HOMER3-205ENST00000542541 GCGP01275 180 aa16.83■□□□□ 0.28
HOMER3-205ENST00000542541 BTN1A1Q13410 526 aa16.83■□□□□ 0.28
HOMER3-205ENST00000542541 RNF183Q96D59 192 aa16.83■□□□□ 0.28
HOMER3-205ENST00000542541 SPRY2O43597 315 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 SOHLH1Q5JUK2 328 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 PRR9Q5T870 116 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 Q6AWC8 147 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 SPATA25Q9BR10 227 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 MLST8Q9BVC4 326 aa16.82■□□□□ 0.28
HOMER3-205ENST00000542541 TRAV21A0A0B4J279 112 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 TRBV20OR9-2A0A075B6H5 130 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 H7BYZ3 331 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 ZNF324O75467 553 aaPredicted RBP16.81■□□□□ 0.28
HOMER3-205ENST00000542541 C1orf158Q8N1D5 194 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 NHLRC2Q8NBF2 726 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 ZC2HC1AQ96GY0 325 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 LINC01587Q99440 93 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 TM2D3Q9BRN9 247 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 BIN3Q9NQY0 253 aa16.81■□□□□ 0.28
HOMER3-205ENST00000542541 IGHV3OR16-12A0A075B7B8 117 aa16.8■□□□□ 0.28
HOMER3-205ENST00000542541 FABP5P3A8MUU1 101 aa16.8■□□□□ 0.28
HOMER3-205ENST00000542541 PFN1P07737 140 aaKnown RBP16.8■□□□□ 0.28
HOMER3-205ENST00000542541 ZNF705AQ6ZN79 300 aaPredicted RBP16.8■□□□□ 0.28
HOMER3-205ENST00000542541 ZMAT4Q9H898 229 aa16.8■□□□□ 0.28
HOMER3-205ENST00000542541 SFTA3P0C7M3 94 aa16.79■□□□□ 0.28
HOMER3-205ENST00000542541 LY96Q9Y6Y9 160 aa16.79■□□□□ 0.28
HOMER3-205ENST00000542541 NHLRC4P0CG21 123 aaPredicted RBP16.78■□□□□ 0.28
HOMER3-205ENST00000542541 RBMY1A1P0DJD3 496 aaKnown RBP16.78■□□□□ 0.28
HOMER3-205ENST00000542541 RBMY1CP0DJD4 496 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 MGST1P10620 155 aaKnown RBP16.78■□□□□ 0.28
HOMER3-205ENST00000542541 ZNF80P51504 273 aaPredicted RBP16.78■□□□□ 0.28
HOMER3-205ENST00000542541 RBMY1FQ15415 496 aaKnown RBP16.78■□□□□ 0.28
HOMER3-205ENST00000542541 FAM162BQ5T6X4 162 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 PYGO2Q9BRQ0 406 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 IGLV2-8P01709 118 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 TMEM241Q24JQ0 296 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 OR11H2Q8NH07 326 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 OCC1Q8TAD7 63 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 OVOL2Q9BRP0 275 aa16.78■□□□□ 0.28
HOMER3-205ENST00000542541 PGPEP1LA6NFU8 196 aa16.76■□□□□ 0.27
HOMER3-205ENST00000542541 SMIM9A6NGZ8 99 aa16.76■□□□□ 0.27
HOMER3-205ENST00000542541 NEU1Q99519 415 aa16.76■□□□□ 0.27
HOMER3-205ENST00000542541 CRIP1P50238 77 aa16.75■□□□□ 0.27
HOMER3-205ENST00000542541 FAM159AQ6UWV7 190 aa16.75■□□□□ 0.27
HOMER3-205ENST00000542541 LINC00467Q9BRT7 94 aa16.75■□□□□ 0.27
HOMER3-205ENST00000542541 NAT8Q9UHE5 227 aa16.75■□□□□ 0.27
HOMER3-205ENST00000542541 IGHV1OR15-1A0A075B7D0 117 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 TMEM218A2RU14 115 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 NDUFA5Q16718 116 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 PRR27Q6MZM9 219 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 SH2D1AO60880 128 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 HTN1P15515 57 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 RRN3P1Q2M238 152 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 Q6ZQT7 251 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 DAZAP1Q96EP5 407 aaKnown RBP16.74■□□□□ 0.27
HOMER3-205ENST00000542541 KCNS1Q96KK3 526 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 RETNQ9HD89 108 aa16.74■□□□□ 0.27
HOMER3-205ENST00000542541 NAGKQ9UJ70 344 aa16.73■□□□□ 0.27
HOMER3-205ENST00000542541 X6R8D5 127 aa16.73■□□□□ 0.27
HOMER3-205ENST00000542541 MIFP14174 115 aa16.72■□□□□ 0.27
HOMER3-205ENST00000542541 TDRG1Q3Y452 100 aa16.72■□□□□ 0.27
HOMER3-205ENST00000542541 MUC21Q5SSG8 566 aa16.72■□□□□ 0.27
HOMER3-205ENST00000542541 LINC01551Q86U37 167 aa16.72■□□□□ 0.27
HOMER3-205ENST00000542541 ORM1P02763 201 aa16.71■□□□□ 0.27
HOMER3-205ENST00000542541 DNAH9Q9NYC9 4486 aa16.71■□□□□ 0.27
HOMER3-205ENST00000542541 CBY3A6NI87 242 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 ZNF705GA8MUZ8 300 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-205ENST00000542541 K7EN84 100 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 ANXA2RQ3ZCQ2 193 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 SDF2L1Q9HCN8 221 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 F8W036 122 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 OR5I1Q13606 314 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 ZNF493Q6ZR52 646 aa16.7■□□□□ 0.26
HOMER3-205ENST00000542541 SEC11CQ9BY50 192 aa16.69■□□□□ 0.26
HOMER3-205ENST00000542541 C11orf21Q9P2W6 132 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms