RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 GAGE12BA1L429 117 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 GAGE7O76087 117 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 BPIFA4PQ86YQ2 179 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 TMED6Q8WW62 240 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 ACTR3CQ9C0K3 210 aaPredicted RBP12.9□□□□□ -0.34
RAP1B-227ENST00000542018 TMEM14CQ9P0S9 112 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
RAP1B-227ENST00000542018 A0A087X0K7 114 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 A0A096LPF7 62 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 H7BYZ3 331 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 MRPS12O15235 138 aaKnown RBP12.89□□□□□ -0.35
RAP1B-227ENST00000542018 RAB5CP51148 216 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 TAS2R45P59539 299 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 FRZBQ92765 325 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 FAM167A-AS1Q96KT0 104 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
RAP1B-227ENST00000542018 TRAV5A0A0B4J249 113 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 DNAH10OSP0CZ25 163 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
RAP1B-227ENST00000542018 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 FAM122CQ6P4D5 195 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
RAP1B-227ENST00000542018 SMR3BP02814 79 aaPredicted RBP12.87□□□□□ -0.35
RAP1B-227ENST00000542018 KHDC3LQ587J8 217 aa12.87□□□□□ -0.35
RAP1B-227ENST00000542018 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
RAP1B-227ENST00000542018 RAB24Q969Q5 203 aa12.87□□□□□ -0.35
RAP1B-227ENST00000542018 RPUSD4Q96CM3 377 aaKnown RBP12.87□□□□□ -0.35
RAP1B-227ENST00000542018 CTXND1A0A1B0GTU2 59 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 STAG3L2P0CL84 134 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 STAG3L3P0CL85 134 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 SULT1A2P50226 295 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 PQLC2Q6ZP29 291 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 Q6ZTI0 123 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
RAP1B-227ENST00000542018 DNAH8Q96JB1 4490 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 PRAC2D3DTV9 90 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 SIVA1O15304 175 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 IGLC2P0DOY2 106 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
RAP1B-227ENST00000542018 ERVFC1-1P60608 527 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 GUK1Q16774 197 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 C18orf15Q96N68 181 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 OR51M1Q9H341 326 aa12.85□□□□□ -0.35
RAP1B-227ENST00000542018 A0A087WTM6 91 aa12.84□□□□□ -0.35
RAP1B-227ENST00000542018 MBD3L1Q8WWY6 194 aa12.84□□□□□ -0.35
RAP1B-227ENST00000542018 PAXXQ9BUH6 204 aa12.84□□□□□ -0.35
RAP1B-227ENST00000542018 OR7C2O60412 319 aa12.83□□□□□ -0.36
RAP1B-227ENST00000542018 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
RAP1B-227ENST00000542018 HAMPP81172 84 aa12.83□□□□□ -0.36
RAP1B-227ENST00000542018 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
RAP1B-227ENST00000542018 ICAM4Q14773 271 aa12.83□□□□□ -0.36
RAP1B-227ENST00000542018 FXYD5Q96DB9 178 aa12.83□□□□□ -0.36
RAP1B-227ENST00000542018 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
RAP1B-227ENST00000542018 H3BQ15 152 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 ZNF253O75346 499 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 NXPH4O95158 308 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 CXorf1O96002 111 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 FHITP49789 147 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 PDE6HQ13956 83 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 TEX261Q6UWH6 196 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 ALKAL2Q6UX46 152 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 FAM213BQ8TBF2 198 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 SUN5Q8TC36 379 aa12.82□□□□□ -0.36
RAP1B-227ENST00000542018 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 EREGO14944 169 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 NBEAP1P0C6P0 100 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 PYYP10082 97 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 LRRC20Q8TCA0 184 aa12.81□□□□□ -0.36
RAP1B-227ENST00000542018 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
RAP1B-227ENST00000542018 HMCN2Q8NDA2 5059 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 TRAV1-1A0A0B4J248 108 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 MAP1LC3B2A6NCE7 125 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 SLC17A3O00476 420 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 HMGB3O15347 200 aaKnown RBP12.8□□□□□ -0.36
RAP1B-227ENST00000542018 H2AFB1P0C5Y9 115 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 GCHFRP30047 84 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
RAP1B-227ENST00000542018 C11orf72Q8NBR9 251 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 ZNF680Q8NEM1 530 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 MAP1LC3BQ9GZQ8 125 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 TMEM167BQ9NRX6 74 aa12.8□□□□□ -0.36
RAP1B-227ENST00000542018 TRAV12-3A0A0B4J271 114 aa12.79□□□□□ -0.36
RAP1B-227ENST00000542018 J3KRW8 73 aa12.79□□□□□ -0.36
RAP1B-227ENST00000542018 EIF3GO75821 320 aaKnown RBP eCLIP12.79□□□□□ -0.36
RAP1B-227ENST00000542018 IFNA7P01567 189 aa12.79□□□□□ -0.36
RAP1B-227ENST00000542018 OR10J4P0C629 311 aa12.79□□□□□ -0.36
RAP1B-227ENST00000542018 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms