RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TMEM263Q8WUH6 116 aaKnown RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 SRSF12Q8WXF0 261 aaKnown RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 TSACCQ96A04 125 aaPredicted RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 FANCD2OSQ96PS1 177 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 DEFB127Q9H1M4 99 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 C6orf106Q9H6K1 298 aaPredicted RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 MRPL35Q9NZE8 188 aaKnown RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 TIMM13Q9Y5L4 95 aaPredicted RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 A0A0J9YY99 117 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 TRBV27A0A0K0K1C4 114 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 LINC01548A6NM66 108 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 LST1O00453 97 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 FOXS1O43638 330 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 TIMM17BO60830 172 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 NXPH4O95158 308 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 IGKV1D-16P01601 117 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 DUTP33316 252 aaKnown RBP3.99□□□□□ -1.77
SNHG1-218ENST00000541615 SAA4P35542 130 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 DAD1P61803 113 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 KLKP1Q107X0 134 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 PIGYQ3MUY2 71 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 GUSBP11Q6P575 273 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF826PQ6ZT77 177 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 C9orf139Q6ZV77 190 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 DYNLRB2Q8TF09 96 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 DCANP1Q8TF63 244 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 OVOL2Q9BRP0 275 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 TIMM21Q9BVV7 248 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 ATG2BQ96BY7 2078 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
SNHG1-218ENST00000541615 TRIP12Q14669 1992 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 TRAV7A0A075B6U4 112 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 IGKV1-6A0A0C4DH72 117 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 A0A0J9YX75 114 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 IQCF6A8MYZ5 107 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 IGHV4-39P01824 125 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 CCKP06307 115 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 COX6B1P14854 86 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF22P17026 224 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 XCL1P47992 114 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 SNRPD3P62318 126 aaKnown RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 RBM3P98179 157 aaKnown RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 TCF15Q12870 199 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 FOXF2Q12947 444 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 MRPL51Q4U2R6 128 aaKnown RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 RSPO2Q6UXX9 243 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-218ENST00000541615 KTN1-AS1Q86SY8 53 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 LYPD1Q8N2G4 141 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF799Q96GE5 643 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 LYZL4Q96KX0 146 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 TM2D3Q9BRN9 247 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 XCL2Q9UBD3 114 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 MOB4Q9Y3A3 225 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 ARHGAP21Q5T5U3 1957 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 KIAA1549Q9HCM3 1950 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 KIAA1549LQ6ZVL6 1849 aa3.98□□□□□ -1.77
SNHG1-218ENST00000541615 PCSK5Q92824 1860 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 A0A087WWL8 130 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 TRAV13-2A0A0B4J235 113 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 IGKV1-8A0A0C4DH67 115 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 TMEM223A0PJW6 202 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 SDHAF1A6NFY7 115 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 IBA57-AS1B1ANH7 110 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 WNT9BO14905 357 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 NDUFA3O95167 84 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 PPP1R17O96001 155 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 IGLV2-14P01704 120 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 RFPL3SP0C7P2 107 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 ARMS2P0C7Q2 107 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 DEFA4P12838 97 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 CRIP2P52943 208 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-218ENST00000541615 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 C10orf113Q5VZT2 155 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 Q8IYB0 196 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 TMEM75Q8N9X5 138 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 LY6G5BQ8NDX9 201 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 ITLN1Q8WWA0 313 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 FAM167A-AS1Q96KT0 104 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 TTTY13Q9BZ97 58 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 ICOSQ9Y6W8 199 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 COL4A2P08572 1712 aa3.97□□□□□ -1.77
SNHG1-218ENST00000541615 PTPRSQ13332 1948 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 IGKV1-12A0A0C4DH73 117 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 IGKV1D-12P01611 117 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 IGLV3-21P80748 117 aaPredicted RBP3.96□□□□□ -1.78
SNHG1-218ENST00000541615 FHL2Q14192 279 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 RHOHQ15669 191 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 C10orf128Q5T292 105 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 SFTA2Q6UW10 78 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 ZCCHC24Q8N2G6 241 aaKnown RBP3.96□□□□□ -1.78
SNHG1-218ENST00000541615 CD177Q8N6Q3 437 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 FAM216BQ8N7L0 139 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 C1orf159Q96HA4 380 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 THADAQ6YHU6 1953 aa3.96□□□□□ -1.78
SNHG1-218ENST00000541615 IGHV1-69DA0A0B4J2H0 117 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
SNHG1-218ENST00000541615 C4orf51C9J302 202 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 294.5 ms