RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LINC00477Q96M19 166 aa20.7■□□□□ 0.9
CCM2-218ENST00000541586 TRBV24-1A0A075B6N3 115 aa20.69■□□□□ 0.9
CCM2-218ENST00000541586 A0A1W2PPQ1 181 aa20.69■□□□□ 0.9
CCM2-218ENST00000541586 RPP21Q9H633 154 aaKnown RBP20.69■□□□□ 0.9
CCM2-218ENST00000541586 RAB5AP20339 215 aa20.68■□□□□ 0.9
CCM2-218ENST00000541586 SMUG1Q53HV7 270 aa20.68■□□□□ 0.9
CCM2-218ENST00000541586 TMA7Q9Y2S6 64 aaKnown RBP20.68■□□□□ 0.9
CCM2-218ENST00000541586 PYGO2Q9BRQ0 406 aa20.67■□□□□ 0.9
CCM2-218ENST00000541586 TRAV25A0A0B4J276 109 aa20.67■□□□□ 0.9
CCM2-218ENST00000541586 ZNF80P51504 273 aaPredicted RBP20.67■□□□□ 0.9
CCM2-218ENST00000541586 FAM162BQ5T6X4 162 aa20.67■□□□□ 0.9
CCM2-218ENST00000541586 FAM210BQ96KR6 192 aa20.67■□□□□ 0.9
CCM2-218ENST00000541586 LENEPQ9Y5L5 61 aa20.67■□□□□ 0.9
CCM2-218ENST00000541586 WIPF1O43516 503 aa20.66■□□□□ 0.9
CCM2-218ENST00000541586 GDF5OSQ5U4N7 250 aa20.66■□□□□ 0.9
CCM2-218ENST00000541586 SPAG8Q99932 426 aaPredicted RBP20.66■□□□□ 0.9
CCM2-218ENST00000541586 SMIM27A0A1W2PRY6 76 aa20.65■□□□□ 0.9
CCM2-218ENST00000541586 SH2D1AO60880 128 aa20.65■□□□□ 0.9
CCM2-218ENST00000541586 KRTAP10-11P60412 298 aa20.65■□□□□ 0.9
CCM2-218ENST00000541586 TCL1AP56279 114 aa20.64■□□□□ 0.9
CCM2-218ENST00000541586 CT83Q5H943 113 aa20.64■□□□□ 0.9
CCM2-218ENST00000541586 OR4B1Q8NGF8 309 aa20.64■□□□□ 0.9
CCM2-218ENST00000541586 OR2K2Q8NGT1 345 aa20.64■□□□□ 0.9
CCM2-218ENST00000541586 TSKUQ8WUA8 353 aa20.64■□□□□ 0.89
CCM2-218ENST00000541586 A0A0J9YX75 114 aa20.63■□□□□ 0.89
CCM2-218ENST00000541586 OR2D3Q8NGH3 330 aa20.63■□□□□ 0.89
CCM2-218ENST00000541586 SORL1Q92673 2214 aa20.62■□□□□ 0.89
CCM2-218ENST00000541586 OR4C46A6NHA9 309 aa20.62■□□□□ 0.89
CCM2-218ENST00000541586 FAM19A4Q96LR4 140 aa20.62■□□□□ 0.89
CCM2-218ENST00000541586 ZNF256Q9Y2P7 627 aaPredicted RBP20.62■□□□□ 0.89
CCM2-218ENST00000541586 TRAV9-1A0A075B6T8 112 aa20.61■□□□□ 0.89
CCM2-218ENST00000541586 A8MWL6 223 aa20.61■□□□□ 0.89
CCM2-218ENST00000541586 DEFB131AP59861 70 aa20.61■□□□□ 0.89
CCM2-218ENST00000541586 RPL19P84098 196 aaKnown RBP20.61■□□□□ 0.89
CCM2-218ENST00000541586 EGFEM1PQ0D2K5 195 aa20.61■□□□□ 0.89
CCM2-218ENST00000541586 EBLN2Q6P2I7 272 aa20.61■□□□□ 0.89
CCM2-218ENST00000541586 SAV1Q9H4B6 383 aaPredicted RBP20.61■□□□□ 0.89
CCM2-218ENST00000541586 RPS10P46783 165 aaKnown RBP20.6■□□□□ 0.89
CCM2-218ENST00000541586 BEAN1Q3B7T3 259 aa20.6■□□□□ 0.89
CCM2-218ENST00000541586 FOXI2Q6ZQN5 318 aa20.6■□□□□ 0.89
CCM2-218ENST00000541586 ZFAND2AQ8N6M9 145 aa20.6■□□□□ 0.89
CCM2-218ENST00000541586 NEU1Q99519 415 aa20.6■□□□□ 0.89
CCM2-218ENST00000541586 FABP5P3A8MUU1 101 aa20.59■□□□□ 0.89
CCM2-218ENST00000541586 PRB2P02812 416 aaPredicted RBP20.59■□□□□ 0.89
CCM2-218ENST00000541586 PRR9Q5T870 116 aa20.59■□□□□ 0.89
CCM2-218ENST00000541586 BTF3L4Q96K17 158 aa20.59■□□□□ 0.89
CCM2-218ENST00000541586 TRBV7-9A0A0J9YWB2 115 aa20.58■□□□□ 0.89
CCM2-218ENST00000541586 ZMAT5Q9UDW3 170 aaKnown RBP20.58■□□□□ 0.89
CCM2-218ENST00000541586 NOTCH1P46531 2555 aa20.58■□□□□ 0.88
CCM2-218ENST00000541586 TYMSP04818 313 aa20.58■□□□□ 0.88
CCM2-218ENST00000541586 MAP6D1Q9H9H5 199 aa20.58■□□□□ 0.88
CCM2-218ENST00000541586 NAT8BQ9UHF3 227 aa20.58■□□□□ 0.88
CCM2-218ENST00000541586 GZMBP10144 247 aa20.57■□□□□ 0.88
CCM2-218ENST00000541586 GTSF1Q8WW33 167 aa20.57■□□□□ 0.88
CCM2-218ENST00000541586 TMEM189A5PLL7 270 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 HIGD1CA8MV81 97 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 J3KRW8 73 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 CRISP2P16562 243 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 NUP35Q8NFH5 326 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 GFRA4Q9GZZ7 299 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 SRD5A3Q9H8P0 318 aa20.56■□□□□ 0.88
CCM2-218ENST00000541586 KNCNA6PVL3 124 aa20.55■□□□□ 0.88
CCM2-218ENST00000541586 SPINK4O60575 86 aa20.55■□□□□ 0.88
CCM2-218ENST00000541586 DUSP14O95147 198 aaKnown RBP20.55■□□□□ 0.88
CCM2-218ENST00000541586 APRG1Q8IVJ8 170 aa20.55■□□□□ 0.88
CCM2-218ENST00000541586 FAM231BA6NCW3 169 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 IGKV3-20P01619 116 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 GPX1P07203 203 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 ZNF124Q15973 351 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 Q6ZQT7 251 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 ODF3Q96PU9 254 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 NBEAL1Q6ZS30 2694 aa20.54■□□□□ 0.88
CCM2-218ENST00000541586 TMSB15BA0A087X1C1 80 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 ORM1P02763 201 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 CD7P09564 240 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 KIR3DS1Q14943 382 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 ACTL10Q5JWF8 245 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 KPRPQ5T749 579 aaPredicted RBP20.53■□□□□ 0.88
CCM2-218ENST00000541586 ODF3L2Q3SX64 289 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 GTSCR1Q86UQ5 136 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 C11orf21Q9P2W6 132 aa20.53■□□□□ 0.88
CCM2-218ENST00000541586 HLA-DRB4P13762 266 aa20.52■□□□□ 0.88
CCM2-218ENST00000541586 LINC01559Q495D7 138 aa20.52■□□□□ 0.88
CCM2-218ENST00000541586 HLA-DRB4X5D2U9 266 aa20.52■□□□□ 0.88
CCM2-218ENST00000541586 KLLNB2CW77 178 aa20.51■□□□□ 0.87
CCM2-218ENST00000541586 FRMD6-AS1P0C7T7 363 aa20.51■□□□□ 0.87
CCM2-218ENST00000541586 RNASE4P34096 147 aaKnown RBP20.51■□□□□ 0.87
CCM2-218ENST00000541586 ZNF575Q86XF7 245 aa20.51■□□□□ 0.87
CCM2-218ENST00000541586 PGLYRP4Q96LB8 373 aa20.51■□□□□ 0.87
CCM2-218ENST00000541586 AGRNO00468 2067 aa20.51■□□□□ 0.87
CCM2-218ENST00000541586 DNAH3Q8TD57 4116 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 XKRY2A2RUG3 117 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 LEPP41159 167 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 FOXA3P55318 350 aaPredicted RBP20.5■□□□□ 0.87
CCM2-218ENST00000541586 MRPL54Q6P161 138 aaKnown RBP20.5■□□□□ 0.87
CCM2-218ENST00000541586 C1orf196B1AJZ1 125 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 H3BMM0 161 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 TRGC2P03986 189 aa20.5■□□□□ 0.87
CCM2-218ENST00000541586 RPS20P60866 119 aaKnown RBP20.5■□□□□ 0.87
CCM2-218ENST00000541586 TRAV21A0A0B4J279 112 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms