RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 AMMECR1Q9Y4X0 333 aaPredicted RBP3.66□□□□□ -1.82
MDM2-226ENST00000540352 FREM3P0C091 2139 aa3.65□□□□□ -1.82
MDM2-226ENST00000540352 TRGV5A0A0B4J1U4 118 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 TRBV6-1A0A0K0K1D8 114 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 PRSS46E5RG02 174 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 INS-IGF2F8WCM5 200 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 M0R135 149 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 UPK2O00526 184 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 FCGR3BO75015 233 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 GP1BBP13224 206 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 SLC25A16P16260 332 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 FKBP2P26885 142 aaKnown RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 LOXP28300 417 aaPredicted RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 IFI27P40305 119 aaPredicted RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 RPL36AP83881 106 aaKnown RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 ZNF816Q0VGE8 651 aaPredicted RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 SDIM1Q6ZPB5 146 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 C18orf65Q6ZTR6 163 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 MIR17HGQ75NE6 70 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 GTSCR1Q86UQ5 136 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 STHQ8IWL8 128 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 BORCS8Q96FH0 119 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 FMC1Q96HJ9 113 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 METTL26Q96S19 204 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 DYNLRB1Q9NP97 96 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.83
MDM2-226ENST00000540352 TNRC18O15417 2968 aaPredicted RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 MKI67P46013 3256 aaKnown RBP3.65□□□□□ -1.83
MDM2-226ENST00000540352 SPTBP11277 2137 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 LAMA2P24043 3122 aaKnown RBP3.64□□□□□ -1.83
MDM2-226ENST00000540352 TRAV12-1A0A0B4J245 112 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 A0A0B4J2C4 111 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 IGKV1-6A0A0C4DH72 117 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 C5orf63A6NC05 138 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 CCL16O15467 120 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 CXCL13O43927 109 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 LINC00271P0C7V0 271 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 MYCNOSP40205 109 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 CCL11P51671 97 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 ZNF137PP52743 207 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 DLX1P56177 255 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 PIGYQ3MUY2 71 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
MDM2-226ENST00000540352 ZNF497Q6ZNH5 498 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 ZNF329Q86UD4 541 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 MDP1Q86V88 176 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 RETNQ9HD89 108 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 COL5A1P20908 1838 aaPredicted RBP3.64□□□□□ -1.83
MDM2-226ENST00000540352 MPDZO75970 2070 aa3.64□□□□□ -1.83
MDM2-226ENST00000540352 TRGV8A0A0C4DH27 118 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 A0A1W2PQD3 144 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 LYZL6O75951 148 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 PRSS1P07477 247 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
MDM2-226ENST00000540352 FGF12P61328 243 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 ERVK-16P61578 105 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 FAM104BQ5XKR9 115 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 C2orf82Q6UX34 121 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 Q8N8P6 123 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 C10orf105Q8TEF2 133 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 SSMEM1Q8WWF3 244 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 FOXC2Q99958 501 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 NABP2Q9BQ15 211 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 KRTAP1-5Q9BYS1 174 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 TTTY13Q9BZ97 58 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 C16orf95Q9H693 158 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 LRP4O75096 1905 aa3.63□□□□□ -1.83
MDM2-226ENST00000540352 RAI1Q7Z5J4 1906 aaPredicted RBP3.63□□□□□ -1.83
MDM2-226ENST00000540352 TNRC6BQ9UPQ9 1833 aaKnown RBP3.62□□□□□ -1.83
MDM2-226ENST00000540352 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 IGKV1-12A0A0C4DH73 117 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 KNCNA6PVL3 124 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 K7EMI3 77 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 BUB3O43684 328 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 IGKV1D-12P01611 117 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 LIFP15018 202 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 CD24P25063 80 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 GFERP55789 205 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 SYNJ2BPP57105 145 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
MDM2-226ENST00000540352 PCBD1P61457 104 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
MDM2-226ENST00000540352 Q6ZRU5 148 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 VN1R4Q7Z5H5 301 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 MKXQ8IYA7 352 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 LINC01561Q8N1V8 128 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 SPTSSAQ969W0 71 aa3.62□□□□□ -1.83
MDM2-226ENST00000540352 TSACCQ96A04 125 aaPredicted RBP3.62□□□□□ -1.83
MDM2-226ENST00000540352 RPUSD1Q9UJJ7 312 aaKnown RBP3.62□□□□□ -1.83
MDM2-226ENST00000540352 MYO9BQ13459 2157 aa3.61□□□□□ -1.83
MDM2-226ENST00000540352 SHANK1Q9Y566 2161 aa3.61□□□□□ -1.83
MDM2-226ENST00000540352 IGKV1-27A0A075B6S5 117 aa3.61□□□□□ -1.83
MDM2-226ENST00000540352 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.61□□□□□ -1.83
MDM2-226ENST00000540352 IGKV1D-43A0A0B4J1Z2 117 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms