RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 TM2D2Q9BX73 214 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00574Q9H8X3 128 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00527Q9UJ94 153 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 FAM215AQ9Y5M1 114 aa4.85□□□□□ -1.63
PTPRD-214ENST00000540109 FSTL3O95633 263 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 COX7A1P24310 79 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 KHDC1LQ5JSQ8 128 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 Q6ZRM9 215 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF826PQ6ZT77 177 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 C8orf31Q8N9H6 132 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 AGFG2O95081 481 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV1-5P01602 117 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 CRPP02741 224 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00477Q96M19 166 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 HS3ST6Q96QI5 342 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00312Q9Y6C7 94 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 WT1P19544 449 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-214ENST00000540109 RNF152Q8N8N0 203 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 LY6G5BQ8NDX9 201 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 TRGV11A0A075B6L2 103 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 LHBP01229 141 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 ARMS2P0C7Q2 107 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 CFC1BP0CG36 223 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 CFC1P0CG37 223 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 CMC4P56277 68 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-214ENST00000540109 FOXF2Q12947 444 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 EIF4EBP1Q13541 118 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-214ENST00000540109 TEX36Q5VZQ5 186 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 C20orf204Q6ZNR8 217 aa4.84□□□□□ -1.63
PTPRD-214ENST00000540109 PTPRBP23467 1997 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 TRAV13-2A0A0B4J235 113 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 P0C879 139 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 NPPCP23582 126 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 PAX9P55771 341 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 Q6ZR03 302 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 APC2O95996 2303 aa4.84□□□□□ -1.64
PTPRD-214ENST00000540109 CD7P09564 240 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 CTRLP40313 264 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 Q86TA4 180 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 A0A087WX48 190 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 GFRALQ6UXV0 394 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 C9orf139Q6ZV77 190 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 TRBV25-1A0A075B6N4 114 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 E9PLD3 99 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 CCL21O00585 134 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 GATA3P23771 443 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 SEM1Q6ZVN7 128 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 SIRPDQ9H106 197 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 TRBV10-2A0A0K0K1G8 114 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 IGHG2P01859 326 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3-35A0A0C4DH35 117 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 LEPROTO15243 131 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 PSPNO60542 156 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 ZNF493Q6ZR52 646 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 MRPL53Q96EL3 112 aaKnown RBP4.83□□□□□ -1.64
PTPRD-214ENST00000540109 S4R3C0 116 aa4.83□□□□□ -1.64
PTPRD-214ENST00000540109 PCNX2A6NKB5 2137 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 KIAA2026Q5HYC2 2103 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 AHCTF1Q8WYP5 2266 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 JMJD7-PLA2G4BH0Y9G9 81 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 K7EM74 188 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 FAM168AQ92567 244 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 MRPL35Q9NZE8 188 aaKnown RBP4.82□□□□□ -1.64
PTPRD-214ENST00000540109 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 FAM236DA0A1B0GTK5 79 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 INS-IGF2F8WCM5 200 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 K7ENP7 123 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 GFRA3O60609 400 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 IGLV2-14P01704 120 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 FAM236CP0DP71 79 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 RNASE2P10153 161 aaKnown RBP4.82□□□□□ -1.64
PTPRD-214ENST00000540109 INSL3P51460 131 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 CCL8P80075 99 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 GATD1Q8NB37 220 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 GTSF1Q8WW33 167 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 XGP55808 180 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 RHOHQ15669 191 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 CD177Q8N6Q3 437 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 ZNF318Q5VUA4 2279 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3OR16-13A0A075B7E8 117 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3-74A0A0B4J1X5 117 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 C15orf62A8K5M9 175 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-214ENST00000540109 EXOC3-AS1Q8N2X6 119 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 LTAP01374 205 aa4.82□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV1D-17A0A075B6S4 117 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV3D-7A0A0C4DH55 119 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 RHODO00212 210 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 FBXL19-AS1Q494R0 122 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 ZNF329Q86UD4 541 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 ITLN1Q8WWA0 313 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 TINCRA0A1B0GVN0 87 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 NDUFS7O75251 213 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV1-39P01597 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms