RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ZFHX2Q9C0A1 2572 aaPredicted RBP10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 A6NJY4 79 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 VSTM5A8MXK1 200 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 SRSF8Q9BRL6 282 aaKnown RBP10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 DPM3Q9P2X0 92 aa10.76□□□□□ -0.69
SCNN1A-215ENST00000540037 TLN1Q9Y490 2541 aaKnown RBP10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 IGLL5B9A064 214 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 ETDBQ3ZM63 59 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 LINC01560Q8TB33 94 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 NXT2Q9NPJ8 142 aaKnown RBP10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 ANKHD1Q8IWZ3 2542 aaKnown RBP10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 PIFOQ8TCI5 191 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 RNF5Q99942 180 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 UFC1Q9Y3C8 167 aa10.75□□□□□ -0.69
SCNN1A-215ENST00000540037 LINC01546A6NGU7 62 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 INSL3P51460 131 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 KLK15Q9H2R5 256 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 E9PLD3 99 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 NPBQ8NG41 125 aa10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
SCNN1A-215ENST00000540037 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 Q8N8P6 123 aa10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 ZNF479Q96JC4 524 aa10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 C12orf74Q32Q52 190 aa10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
SCNN1A-215ENST00000540037 J3KRW8 73 aa10.72□□□□□ -0.69
SCNN1A-215ENST00000540037 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
SCNN1A-215ENST00000540037 NRACQ8N912 160 aa10.72□□□□□ -0.69
SCNN1A-215ENST00000540037 HIST1H4GQ99525 98 aa10.72□□□□□ -0.69
SCNN1A-215ENST00000540037 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
SCNN1A-215ENST00000540037 B9A039 149 aa10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 S100A7AQ86SG5 101 aa10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 SPAG8Q99932 426 aaPredicted RBP10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 SPTBN1Q01082 2364 aaKnown RBP10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 Q8NA96 180 aa10.71□□□□□ -0.69
SCNN1A-215ENST00000540037 SPTA1P02549 2419 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 ATP5LO75964 103 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 CEACAM3P40198 252 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 SFTA2Q6UW10 78 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 MYOZ3Q8TDC0 251 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 SIGMAR1Q99720 223 aa10.71□□□□□ -0.7
SCNN1A-215ENST00000540037 IGHV7-4-1A0A0J9YVY3 117 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 CD3EP07766 207 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 LAGE3Q14657 143 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 CEP295Q9C0D2 2601 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 CLEC3BP05452 202 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 OR11H6Q8NGC7 330 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
SCNN1A-215ENST00000540037 IGF1P05019 195 aa10.69□□□□□ -0.7
SCNN1A-215ENST00000540037 C15orf32Q32M92 178 aa10.69□□□□□ -0.7
SCNN1A-215ENST00000540037 LY6G5BQ8NDX9 201 aa10.69□□□□□ -0.7
SCNN1A-215ENST00000540037 ECSCRQ19T08 205 aa10.69□□□□□ -0.7
SCNN1A-215ENST00000540037 A0A087WX48 190 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 BUB3O43684 328 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 CIDEAO60543 219 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 CYSLTR1Q9Y271 337 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 VPS13CQ709C8 3753 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 CCDC144NLQ6NUI1 221 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 F8W1H4 67 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 H3BVH4 76 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 SPANXN1Q5VSR9 72 aa10.68□□□□□ -0.7
SCNN1A-215ENST00000540037 COL12A1Q99715 3063 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 TRAV8-2A0A0B4J237 113 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 DEFB1P60022 68 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 SRSF2Q01130 221 aaKnown RBP10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 Q5PR19 223 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 PRR9Q5T870 116 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 AKAP6Q13023 2319 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 CLPSL1A2RUU4 121 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 ODF3BA8MYP8 253 aa10.67□□□□□ -0.7
SCNN1A-215ENST00000540037 TRBV7-3A0A075B6L6 115 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 CLEC19AQ6UXS0 136 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 WFDC12Q8WWY7 111 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 FAM90A27PA6NNH2 459 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 G3V318 75 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 VMO1Q7Z5L0 202 aa10.66□□□□□ -0.7
SCNN1A-215ENST00000540037 SRSF1Q07955 248 aaKnown RBP eCLIP10.65□□□□□ -0.7
SCNN1A-215ENST00000540037 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms